RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 CASS4Q9NQ75 786 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 PRSS16Q9NQE7 514 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 ZNF358Q9NW07 568 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 COMMD8Q9NX08 183 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 GDAP2Q9NXN4 497 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 CPSF3Q9UKF6 684 aaKnown RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 FZD4Q9ULV1 537 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 KCNJ14Q9UNX9 436 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 DNM3Q9UQ16 869 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 DMTF1Q9Y222 760 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 PTPRDP23468 1912 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3DA0A087WVF3 549 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3IA0A087WXS9 549 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3EA0A087X179 549 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3KA0A087X1G2 549 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 A0A0B4J269 797 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 SCO2A0A1W2PP80 73 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 PMS2P1A4D2B8 440 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3FA6NER0 549 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 EFCAB7A8K855 629 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TMEM229AB2RXF0 380 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3LB9A6J9 549 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 K7ESM1 405 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 HNRNPDLO14979 420 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 GREM1O60565 184 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 RNGTTO60942 597 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 RNASEH2AO75792 299 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 ATP5BP06576 529 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3HP0C7X1 549 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 MAPTP10636 758 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 PLS3P13797 630 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 GSPT1P15170 499 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 PTGIRP43119 386 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 CHRNA4P43681 627 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 PLA2G4AP47712 749 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 CCT2P78371 535 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 AAMPQ13685 434 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 KCNJ12Q14500 433 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 DBN1Q16643 649 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 CDKN3Q16667 212 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3GQ6DHY5 549 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3CQ6IPX1 549 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 ZCCHC8Q6NZY4 707 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 HS2ST1Q7LGA3 356 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 EFL1Q7Z2Z2 1120 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 DTX1Q86Y01 620 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TBC1D3Q8IZP1 549 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 DAW1Q8N136 415 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 LRRC52Q8N7C0 313 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TSEN2Q8NCE0 465 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 GPBAR1Q8TDU6 330 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 WFIKKN2Q8TEU8 576 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 CACTINQ8WUQ7 758 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 APOBEC4Q8WW27 367 aaKnown RBP6.01□□□□□ -1.45
ATXN3-245ENST00000556958 SORCS1Q8WY21 1168 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 NAT6Q93015 286 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 TMEM159Q96B96 161 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 IFT43Q96FT9 208 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 HAPLN2Q9GZV7 340 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 CCSER2Q9H7U1 834 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 ETNK1Q9HBU6 452 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 BRMS1Q9HCU9 246 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 ANO2Q9NQ90 1003 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 UCKL1Q9NWZ5 548 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 SEL1LQ9UBV2 794 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 ITGB1BP2Q9UKP3 347 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 AGAP1Q9UPQ3 857 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 SNX9Q9Y5X1 595 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 CSMD1Q96PZ7 3565 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 HIVEP1P15822 2718 aa6.01□□□□□ -1.45
ATXN3-245ENST00000556958 UBE4BO95155 1302 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 A0A1W2PP55 124 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 HEATR9A2RTY3 570 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 ZNF891A8MT65 544 aaPredicted RBP6□□□□□ -1.45
ATXN3-245ENST00000556958 PRAMEF26H0Y7S4 382 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 LATO43561 262 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 FAM189A1O60320 539 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 TLR5O60602 858 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 DIAPH2O60879 1101 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 ATP2C2O75185 946 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 PIAS2O75928 621 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 CNTN5O94779 1100 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 IL18RAPO95256 599 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 PDGFRBP09619 1106 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 RNF224P0DH78 156 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 GOT1P17174 413 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 WT1P19544 449 aaPredicted RBP6□□□□□ -1.45
ATXN3-245ENST00000556958 PDIA3P30101 505 aaKnown RBP6□□□□□ -1.45
ATXN3-245ENST00000556958 CCT6AP40227 531 aaKnown RBP6□□□□□ -1.45
ATXN3-245ENST00000556958 HNRNPKP61978 463 aaKnown RBP eCLIP6□□□□□ -1.45
ATXN3-245ENST00000556958 DOC2BQ14184 412 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 FGL2Q14314 439 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 NR0B2Q15466 257 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 SND1Q7KZF4 910 aaKnown RBP eCLIP6□□□□□ -1.45
ATXN3-245ENST00000556958 ZFAND4Q86XD8 727 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 FBXL16Q8N461 479 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 CSGALNACT2Q8N6G5 542 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 RBBP8NLQ8NC74 664 aaPredicted RBP6□□□□□ -1.45
ATXN3-245ENST00000556958 OR6B3Q8NGW1 331 aa6□□□□□ -1.45
ATXN3-245ENST00000556958 OR14C36Q8NHC7 312 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms