RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PLA2G2AP14555 144 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 CD19P15391 556 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 PFKFB1P16118 471 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 SLC6A4P31645 630 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 ACTN2P35609 894 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 TBX4P57082 545 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 YWHAEP62258 255 aaKnown RBP12.32□□□□□ -0.44
ACTN1-221ENST00000556571 BNIP3Q12983 259 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 SFMBT2Q5VUG0 894 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 ZNF843Q8N446 348 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 OR14C36Q8NHC7 312 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 UBA3Q8TBC4 463 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 RFFLQ8WZ73 363 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 IRGQQ8WZA9 623 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 FAM129BQ96TA1 746 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 INTS6Q9UL03 887 aaKnown RBP12.32□□□□□ -0.44
ACTN1-221ENST00000556571 ERVW-1Q9UQF0 538 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 MAPK8IP1Q9UQF2 711 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 MUC22E2RYF6 1773 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3DA0A087WVF3 549 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3IA0A087WXS9 549 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3EA0A087X179 549 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3KA0A087X1G2 549 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3FA6NER0 549 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TTC34A8MYJ7 566 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3LB9A6J9 549 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 O00370 1275 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 LATO43561 262 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 BRINP1O60477 761 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 MAGEC1O60732 1142 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 ADH1BP00325 375 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3HP0C7X1 549 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 C5AR1P21730 350 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 GLDCP23378 1020 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 CMA1P23946 247 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 ADPRHP54922 357 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 RPS24P62847 133 aaKnown RBP12.31□□□□□ -0.44
ACTN1-221ENST00000556571 CUL2Q13617 745 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 CDH18Q13634 790 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 EDRF1Q3B7T1 1238 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 PKDCCQ504Y2 493 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 ZCWPW2Q504Y3 356 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3GQ6DHY5 549 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 NADSYN1Q6IA69 706 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3CQ6IPX1 549 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 NAPEPLDQ6IQ20 393 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 IQCHQ86VS3 1027 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D3Q8IZP1 549 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-221ENST00000556571 CARNMT1Q8N4J0 409 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 AADATQ8N5Z0 425 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 MFSD2AQ8NA29 543 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 CLCA2Q9UQC9 943 aa12.31□□□□□ -0.44
ACTN1-221ENST00000556571 CETN3O15182 167 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 LTFP02788 710 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 EPB41P11171 864 aaKnown RBP12.3□□□□□ -0.44
ACTN1-221ENST00000556571 ACP1P24666 158 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 NUDT1P36639 197 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 CTSOP43234 321 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-221ENST00000556571 PSMD8P48556 350 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 ECT2LQ008S8 904 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 E2F1Q01094 437 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 TLE3Q04726 772 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 DNM1Q05193 864 aaKnown RBP12.3□□□□□ -0.44
ACTN1-221ENST00000556571 OVGP1Q12889 678 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 TBC1D25Q3MII6 688 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 FSCBQ5H9T9 825 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 MS4A13Q5J8X5 152 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 PITRM1Q5JRX3 1037 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 RNF219Q5W0B1 726 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-221ENST00000556571 LCLAT1Q6UWP7 414 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 KANSL1Q7Z3B3 1105 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 PRPF39Q86UA1 669 aaKnown RBP12.3□□□□□ -0.44
ACTN1-221ENST00000556571 STK40Q8N2I9 435 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 DCBLD1Q8N8Z6 715 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 SLC35F5Q8WV83 523 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 EEF2KMTQ96G04 330 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 PRICKLE1Q96MT3 831 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-221ENST00000556571 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 SLCO3A1Q9UIG8 710 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 HPSEQ9Y251 543 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 COQ4Q9Y3A0 265 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 CEP83Q9Y592 693 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 ITIH6Q6UXX5 1313 aa12.3□□□□□ -0.44
ACTN1-221ENST00000556571 MGAQ8IWI9 3026 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 GABBR2O75899 941 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 LUC7L3O95232 432 aaKnown RBP12.29□□□□□ -0.44
ACTN1-221ENST00000556571 IL1BP01584 269 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 TBXAS1P24557 533 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-221ENST00000556571 NNMTP40261 264 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 SYKP43405 635 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 RGS7P49802 495 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 CXADRP78310 365 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 INSM1Q01101 510 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-221ENST00000556571 CFHR1Q03591 330 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 CCDC173Q0VFZ6 552 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 DPYDQ12882 1025 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 ELAVL3Q14576 367 aaKnown RBP12.29□□□□□ -0.44
ACTN1-221ENST00000556571 PROX2Q3B8N5 592 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 DCAF6Q58WW2 860 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms