RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 MBL2P11226 248 aaPredicted RBP11.13□□□□□ -0.63
LINC01550-206ENST00000556462 RHOQP17081 205 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 MX2P20592 715 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 TACR2P21452 398 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 CDC25CP30307 473 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 CORO1AP31146 461 aaKnown RBP11.13□□□□□ -0.63
LINC01550-206ENST00000556462 CHKAP35790 457 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 DHX9Q08211 1270 aaKnown RBP11.13□□□□□ -0.63
LINC01550-206ENST00000556462 WASHC5Q12768 1159 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 C5orf22Q49AR2 442 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 STXBP5Q5T5C0 1151 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 MAB21L3Q8N8X9 362 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 NAT8LQ8N9F0 302 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 ZSCAN18Q8TBC5 510 aaPredicted RBP11.13□□□□□ -0.63
LINC01550-206ENST00000556462 PKNOX2Q96KN3 472 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 SLC39A8Q9C0K1 460 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 BRD8Q9H0E9 1235 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 NOL6Q9H6R4 1146 aaKnown RBP11.13□□□□□ -0.63
LINC01550-206ENST00000556462 ASAH2Q9NR71 780 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 TMEM248Q9NWD8 314 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 SMPD4Q9NXE4 827 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 PAK5Q9P286 719 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 MTRF1LQ9UGC7 380 aaKnown RBP11.13□□□□□ -0.63
LINC01550-206ENST00000556462 MSRAQ9UJ68 235 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 AGO1Q9UL18 857 aaKnown RBP11.13□□□□□ -0.63
LINC01550-206ENST00000556462 HPCAL4Q9UM19 191 aa11.13□□□□□ -0.63
LINC01550-206ENST00000556462 TCRBV7S3A2A0A539 114 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 MOSPD3O75425 235 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 HNRNPA1P09651 372 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC01550-206ENST00000556462 MYL4P12829 197 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 PTPN2P17706 415 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 SLC11A2P49281 568 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 SMAD3P84022 425 aaKnown RBP11.12□□□□□ -0.63
LINC01550-206ENST00000556462 MORF4L2Q15014 288 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 RAB30Q15771 203 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 UAP1Q16222 522 aaPredicted RBP11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ANKRD22Q5VYY1 191 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 RFWD3Q6PCD5 774 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 TFAP2DQ7Z6R9 452 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 PCGF5Q86SE9 256 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 CHSY1Q86X52 802 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 UMODL1-AS1Q8N2C9 162 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 TAB3Q8N5C8 712 aaPredicted RBP11.12□□□□□ -0.63
LINC01550-206ENST00000556462 DEPDC1BQ8WUY9 529 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 RPRD1AQ96P16 312 aaPredicted RBP11.12□□□□□ -0.63
LINC01550-206ENST00000556462 SLC46A2Q9BY10 475 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 VIPAS39Q9H9C1 493 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 STOML2Q9UJZ1 356 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 CPQQ9Y646 472 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 PDE4DIPQ5VU43 2346 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 A0A0A0MRY4 1105 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 KCNK1O00180 336 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 METTL18O95568 372 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 RHOP08100 348 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 IRF1P10914 325 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 BMP8BP34820 402 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ACTN2P35609 894 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 SLC7A9P82251 487 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ZNF33AQ06730 810 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ANKRD20A2Q5SQ80 823 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ADGRF1Q5T601 910 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ANKRD20A1Q5TYW2 823 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ANKRD20A3Q5VUR7 823 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ARHGAP36Q6ZRI8 547 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 PPIL6Q8IXY8 311 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 LGI2Q8N0V4 545 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 IQCKQ8N0W5 287 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 SHKBP1Q8TBC3 707 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 GDPD5Q8WTR4 605 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 PRCCQ92733 491 aaPredicted RBP11.12□□□□□ -0.63
LINC01550-206ENST00000556462 TCEAL4Q96EI5 215 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 TSGA13Q96PP4 275 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 LMAN2LQ9H0V9 348 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 SLC28A3Q9HAS3 691 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 RAB6BQ9NRW1 208 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 FAM53CQ9NYF3 392 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 SHOC2Q9UQ13 582 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 ATP8A1Q9Y2Q0 1164 aa11.12□□□□□ -0.63
LINC01550-206ENST00000556462 OBSL1O75147 1896 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 CLUHO75153 1309 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 SZT2Q5T011 3432 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 F5H5T6 163 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 RNF103O00237 685 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 MAFKO60675 156 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 HSD17B3P37058 310 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 BASP1P80723 227 aaKnown RBP11.11□□□□□ -0.63
LINC01550-206ENST00000556462 GAD2Q05329 585 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 KCNC3Q14003 757 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 KCNJ11Q14654 390 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 C4orf22Q6V702 233 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 Q6ZNB5 142 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 HOOK3Q86VS8 718 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 CIR1Q86X95 450 aaPredicted RBP11.11□□□□□ -0.63
LINC01550-206ENST00000556462 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 ZNF567Q8N184 647 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 CFAP52Q8N1V2 620 aa11.11□□□□□ -0.63
LINC01550-206ENST00000556462 ZCCHC9Q8N567 271 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms