RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GALNT15Q8N3T1 639 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 AMER2Q8N7J2 671 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 GLB1L3Q8NCI6 653 aaPredicted RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 SLC44A5Q8NCS7 719 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 APIPQ96GX9 242 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 ADPGKQ9BRR6 497 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 KATNAL1Q9BW62 490 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 QRSL1Q9H0R6 528 aaKnown RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 EPC1Q9H2F5 836 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 MAGEF1Q9HAY2 307 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 DDX4Q9NQI0 724 aaKnown RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 DNAJC28Q9NX36 388 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 EPS15L1Q9UBC2 864 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 CLIP2Q9UDT6 1046 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 TUBE1Q9UJT0 475 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 GPR45Q9Y5Y3 372 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 GREB1LQ9C091 1923 aaPredicted RBP5.5□□□□□ -1.53
SRP54-211ENST00000556445 MYH4Q9Y623 1939 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 POM121BA6NF01 834 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 MPHOSPH10O00566 681 aaKnown RBP5.5□□□□□ -1.53
SRP54-211ENST00000556445 IKBKBO14920 756 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 NEMFO60524 1076 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 PDHBP11177 359 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 DPEP1P16444 411 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 RPL17P18621 184 aaKnown RBP5.5□□□□□ -1.53
SRP54-211ENST00000556445 NR4A1P22736 598 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 SHMT1P34896 483 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 ALDH9A1P49189 494 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 TOB1P50616 345 aaPredicted RBP5.5□□□□□ -1.53
SRP54-211ENST00000556445 MRPL12P52815 198 aaKnown RBP5.5□□□□□ -1.53
SRP54-211ENST00000556445 HMGA2P52926 109 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 TNFAIP1Q13829 316 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 FHL2Q14192 279 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 NPY5RQ15761 445 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 ADRM1Q16186 407 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 PFKFB4Q16877 469 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 FAM110CQ1W6H9 321 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 MPEG1Q2M385 716 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 MST1LQ2TV78 715 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 UAP1L1Q3KQV9 507 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 FBXO47Q5MNV8 452 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 TATDN1Q6P1N9 297 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 SHC4Q6S5L8 630 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 BTNL9Q6UXG8 535 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 PIK3AP1Q6ZUJ8 805 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 HEATR3Q7Z4Q2 680 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 XYLT1Q86Y38 959 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 ANKRD13BQ86YJ7 626 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 RNF152Q8N8N0 203 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 IQUBQ8NA54 791 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 MSANTD4Q8NCY6 345 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 OR10H5Q8NGA6 315 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 ZNF480Q8WV37 535 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 FAM151AQ8WW52 585 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 AUTS2Q8WXX7 1259 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 LARP4BQ92615 738 aaKnown RBP5.5□□□□□ -1.53
SRP54-211ENST00000556445 COA7Q96BR5 231 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 CENPTQ96BT3 561 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 AK8Q96MA6 479 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 CGRRF1Q99675 332 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 RAB34Q9BZG1 259 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 TRIM5Q9C035 493 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 CUEDC2Q9H467 287 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 SH2D4AQ9H788 454 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 ABCF3Q9NUQ8 709 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 XPO7Q9UIA9 1087 aaKnown RBP5.5□□□□□ -1.53
SRP54-211ENST00000556445 SCOCQ9UIL1 159 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 SNX13Q9Y5W8 968 aa5.5□□□□□ -1.53
SRP54-211ENST00000556445 RPTORQ8N122 1335 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 SCN9AQ15858 1988 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 BAZ2BQ9UIF8 2168 aaKnown RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 ZNF646O15015 1829 aaPredicted RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 SMCO2A6NFE2 343 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 FOXN3O00409 490 aaPredicted RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 ACKR2O00590 384 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 ZBTB5O15062 677 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 POLR2DO15514 142 aaKnown RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 ADCY6O43306 1168 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 CYTH3O43739 400 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 DOK2O60496 412 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 SOAT2O75908 522 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 URI1O94763 535 aaPredicted RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 GASTP01350 101 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 GCFC2P16383 781 aaKnown RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 ATF7P17544 494 aaPredicted RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 MAKP20794 623 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 CRHR1P34998 444 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 PPP1R2P41236 205 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 SLC1A4P43007 532 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 PAPOLAP51003 745 aaKnown RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 ITGA8P53708 1063 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 SRSF2Q01130 221 aaKnown RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 CDC16Q13042 620 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 IQCB1Q15051 598 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 TMEM266Q2M3C6 531 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 PRAMEF14Q5SWL7 426 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 ANKS6Q68DC2 871 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 Q6ZPA2 131 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 RHOUQ7L0Q8 258 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 KRT74Q7RTS7 529 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms