RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MYH15Q9Y2K3 1946 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 KANSL1LA0AUZ9 987 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 CLOCKO15516 846 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 VCLP18206 1134 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 PIK3R1P27986 724 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 SCARA3Q6AZY7 606 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 ADAM32Q8TC27 787 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 PLEKHO2Q8TD55 490 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 SLC2A14Q8TDB8 520 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 FNIP1Q8TF40 1166 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 TXLNGYQ9BZA5 131 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 POMKQ9H5K3 350 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 COG4Q9H9E3 785 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 ZNF180Q9UJW8 692 aa15.33■□□□□ 0.05
ARHGEF40-207ENST00000556399 MAFO75444 373 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 TCF4P15884 667 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 CRABP2P29373 138 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 PLIN5Q00G26 463 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 PPP1R15BQ5SWA1 713 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 ERO1BQ86YB8 467 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 PSTKQ8IV42 348 aaKnown RBP15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 CDH19Q9H159 772 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 CDT1Q9H211 546 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 SPATA31A6Q5VVP1 1343 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 BNIP3LO60238 219 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 MSX2P35548 267 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 TRPC1P48995 793 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 PLK1P53350 603 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 GALNTL6Q49A17 601 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZNF470Q6ECI4 717 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 SLC22A9Q8IVM8 553 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 REPS2Q8NFH8 660 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 SLC4A5Q9BY07 1137 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 ADAM7Q9H2U9 754 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 RUBCNLQ9H714 662 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 SYBUQ9NX95 663 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 ATXN10Q9UBB4 475 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 TRHDEQ9UKU6 1024 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZMYND8Q9ULU4 1186 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 PRPF19Q9UMS4 504 aaKnown RBP15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 PSMD13Q9UNM6 376 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 TSC22D4Q9Y3Q8 395 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 LRRC42Q9Y546 428 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 A0A087WXM4 84 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 PYGLP06737 847 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 FCGR1AP12314 374 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 PLD5Q8N7P1 536 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 SLC25A23Q9BV35 468 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 ACE2Q9BYF1 805 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 TJP2Q9UDY2 1190 aa15.33■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZBTB24O43167 697 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 CFHP08603 1231 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 GOT1P17174 413 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 TAF5Q15542 800 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 LMO3Q8TAP4 145 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 DACH2Q96NX9 599 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 RTKNQ9BST9 563 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 DHX33Q9H6R0 707 aaKnown RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 SLC38A7Q9NVC3 462 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 RAP2CQ9Y3L5 183 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 RGPD5Q99666 1765 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 HNRNPRO43390 633 aaKnown RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 BAIAP3O94812 1187 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 KLF10Q13118 480 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 TCEAL1Q15170 157 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 BLOC1S5Q8TDH9 187 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 DACT3Q96B18 629 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 DCUN1D1Q96GG9 259 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 SCHIP1Q9P0W5 487 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZNF142P52746 1687 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 MYH7P12883 1935 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 MYO1GB0I1T2 1018 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 SPATA31C2B4DYI2 1134 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 PSMD12O00232 456 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 INPP4BO15327 924 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 FBXO21O94952 628 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 HMBSP08397 361 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 ACAT1P24752 427 aaKnown RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 PSME3P61289 254 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 PRKD1Q15139 912 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 NEDD8Q15843 81 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 PTAR1Q7Z6K3 402 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 C12orf29Q8N999 325 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 SLC35B2Q8TB61 432 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 TFAP2BQ92481 460 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 SNX19Q92543 992 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 EBF3Q9H4W6 596 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 SOAT2O75908 522 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 PEX2P28328 305 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 VWA5B1Q5TIE3 1220 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 MRNIPQ6NTE8 343 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 ABHD15Q6UXT9 468 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 DCAKDQ8WVC6 231 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZNF516Q92618 1163 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 PIF1Q9H611 641 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 AAASQ9NRG9 546 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 AFF4Q9UHB7 1163 aaKnown RBP15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 RNF112Q9ULX5 631 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 PCDHGC3Q9UN70 934 aa15.32■□□□□ 0.04
ARHGEF40-207ENST00000556399 TNFSF13BQ9Y275 285 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms