RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 DTNAQ9Y4J8 743 aa5.71□□□□□ -1.5
PRPF39-209ENST00000556353 SAMD9LQ8IVG5 1584 aa5.71□□□□□ -1.5
PRPF39-209ENST00000556353 PPP6R2O75170 966 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 TAF5LO75529 589 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 TGM2P21980 687 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 CIITAP33076 1130 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 POLD2P49005 469 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 PGGT1BP53609 377 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 ARL6IP4Q66PJ3 421 aaKnown RBP5.7□□□□□ -1.5
PRPF39-209ENST00000556353 NUGGCQ68CJ6 796 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 WDR93Q6P2C0 686 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 DDIASQ8IXT1 998 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 ADPRHL1Q8NDY3 354 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 PLCH2O75038 1416 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 REREQ9P2R6 1566 aa5.7□□□□□ -1.5
PRPF39-209ENST00000556353 EVPLQ92817 2033 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 TROQ12816 1431 aaPredicted RBP5.69□□□□□ -1.5
PRPF39-209ENST00000556353 FMN1Q68DA7 1419 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 RASA4BC9J798 803 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 RHODO00212 210 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 HNRNPDLO14979 420 aaKnown RBP5.69□□□□□ -1.5
PRPF39-209ENST00000556353 RASA4O43374 803 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 CNTN5O94779 1100 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 GLP2RO95838 553 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 P2RX3P56373 397 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 SLC37A1P57057 533 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 GAD2Q05329 585 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 HLTFQ14527 1009 aaKnown RBP eCLIP5.69□□□□□ -1.5
PRPF39-209ENST00000556353 GPR162Q16538 588 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 TTLL5Q6EMB2 1281 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 SLC39A5Q6ZMH5 540 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 OR52N4Q8NGI2 321 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 ASB5Q8WWX0 329 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 CLMNQ96JQ2 1002 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 RIPOR3Q96MK2 946 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 ZNF347Q96SE7 839 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 TM7SF3Q9NS93 570 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 LAMP3Q9UQV4 416 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 ARHGAP5Q13017 1502 aa5.69□□□□□ -1.5
PRPF39-209ENST00000556353 INO80Q9ULG1 1556 aaPredicted RBP5.68□□□□□ -1.5
PRPF39-209ENST00000556353 A6NNC1 897 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 LACTBL1A8MY62 500 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 KAT7O95251 611 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 WNT1P04628 370 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 CHRNB1P11230 501 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 HOXB2P14652 356 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 TM4SF4P48230 202 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 LONRF1Q17RB8 773 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 TMEM174Q8WUU8 243 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 LPAR1Q92633 364 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 TMEM204Q9BSN7 226 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 EPS8L2Q9H6S3 715 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 MAGI2Q86UL8 1455 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 ADGBQ8N7X0 1667 aa5.68□□□□□ -1.5
PRPF39-209ENST00000556353 PLXNC1O60486 1568 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 TRIP12Q14669 1992 aaPredicted RBP5.67□□□□□ -1.5
PRPF39-209ENST00000556353 CASKIN1Q8WXD9 1431 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 SCAPERQ9BY12 1400 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 FYCO1Q9BQS8 1478 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 ANO9A1A5B4 782 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 NKX2-8O15522 239 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 NFATC1O95644 943 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 NTSR2O95665 410 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 RAB30Q15771 203 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 KIAA1755Q5JYT7 1200 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 UBAP2Q5T6F2 1119 aaKnown RBP5.67□□□□□ -1.5
PRPF39-209ENST00000556353 IZUMO3Q5VZ72 239 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 CYB5R4Q7L1T6 521 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 PAQR4Q8N4S7 273 aaPredicted RBP5.67□□□□□ -1.5
PRPF39-209ENST00000556353 OR2C3Q8N628 320 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 B4GALNT2Q8NHY0 566 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 ZPBPQ9BS86 351 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 RBM38Q9H0Z9 239 aaKnown RBP5.67□□□□□ -1.5
PRPF39-209ENST00000556353 TASP1Q9H6P5 420 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 CERS4Q9HA82 394 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 SUPT6HQ7KZ85 1726 aaKnown RBP5.67□□□□□ -1.5
PRPF39-209ENST00000556353 SYCP2Q9BX26 1530 aa5.67□□□□□ -1.5
PRPF39-209ENST00000556353 C9orf84Q5VXU9 1444 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 TRAPPC8Q9Y2L5 1435 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 MROH2AA6NES4 1674 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 CCDC18Q5T9S5 1454 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 ZNF518AQ6AHZ1 1483 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 H0YGN5 161 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 PCDH17O14917 1159 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 SPTLC2O15270 562 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 CER1O95813 267 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 ALDOAP04075 364 aaKnown RBP5.66□□□□□ -1.5
PRPF39-209ENST00000556353 ANXA6P08133 673 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 KCNJ4P48050 445 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 GRM4Q14833 912 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 AAK1Q2M2I8 961 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 ODF3L2Q3SX64 289 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 TTC39AQ5SRH9 613 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 ANKRD40Q6AI12 368 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 KSR2Q6VAB6 950 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 SFXN1Q9H9B4 322 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.66□□□□□ -1.5
PRPF39-209ENST00000556353 TIAM1Q13009 1591 aa5.66□□□□□ -1.5
PRPF39-209ENST00000556353 CLTCQ00610 1675 aaKnown RBP5.66□□□□□ -1.5
PRPF39-209ENST00000556353 ATP10AO60312 1499 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms