RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 ACTN2P35609 894 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 GARSP41250 739 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 IFI35P80217 286 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 EFEMP1Q12805 493 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 STAT4Q14765 748 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 LONRF1Q17RB8 773 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 HP1BP3Q5SSJ5 553 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 SPOUT1Q5T280 376 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 OTOP2Q7RTS6 562 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 KLHDC8BQ8IXV7 354 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 ZBED8Q8IZ13 594 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 ZNF567Q8N184 647 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 OVCA2Q8WZ82 227 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 TBC1D31Q96DN5 1066 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 TMEM169Q96HH4 297 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 MYRFLQ96LU7 910 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 TSGA13Q96PP4 275 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 PRMT1Q99873 361 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 GORASP1Q9BQQ3 440 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 FRMD8Q9BZ67 464 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 SIK2Q9H0K1 926 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 PLAC1Q9HBJ0 212 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 RXFP1Q9HBX9 757 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 CXXC1Q9P0U4 656 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 IGSF9Q9P2J2 1179 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 LGALS13Q9UHV8 139 aa9.74□□□□□ -0.85
HNRNPC-223ENST00000556142 IGLV3-10A0A075B6K4 115 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 A0A087WUV0 522 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 DRGXA6NNA5 263 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 E7EVH7 732 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 E9PAM4 449 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 RNF103O00237 685 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 C2CD2LO14523 706 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 FGF10O15520 208 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 CACNG3O60359 315 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 OPHN1O60890 802 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 SHOX2O60902 331 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 ZNF189O75820 626 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 GJB5O95377 273 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 AGTP01019 485 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 C1QAP02745 245 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 SRGAP2BP0DMP2 458 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 SLC2A3P11169 496 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 BMP1P13497 986 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 NR1D1P20393 614 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 CD68P34810 354 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 FDFT1P37268 417 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 MAGOHP61326 146 aaKnown RBP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 ZNF33AQ06730 810 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 AP1B1Q10567 949 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 PPIGQ13427 754 aaKnown RBP eCLIP9.73□□□□□ -0.851e-9■□□□□ 9.6
HNRNPC-223ENST00000556142 AAK1Q2M2I8 961 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 PARP6Q2NL67 630 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 MS4A13Q5J8X5 152 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 KIAA1841Q6NSI8 718 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 PPP1R21Q6ZMI0 780 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 TDRPQ86YL5 185 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 ANKMY2Q8IV38 441 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 FBXO36Q8NEA4 188 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 LRFN3Q9BTN0 628 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 SLC39A8Q9C0K1 460 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 ZBP1Q9H171 429 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 CCSER2Q9H7U1 834 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 NDFIP2Q9NV92 336 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 MARCH2Q9P0N8 246 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 FNIP2Q9P278 1114 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 BCCIPQ9P287 314 aaKnown RBP eCLIP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 PPARGC1AQ9UBK2 798 aaKnown RBP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 ZNF212Q9UDV6 495 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 SLC12A6Q9UHW9 1150 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 MSRAQ9UJ68 235 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 PTPRSQ13332 1948 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 GREB1Q4ZG55 1949 aa9.73□□□□□ -0.85
HNRNPC-223ENST00000556142 SLC12A8A0AV02 714 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 TLDC2A0PJX2 215 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 ZNF840PA6NDX5 716 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 AVILO75366 819 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 FGBP02675 491 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 MX2P20592 715 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 SSTR1P30872 391 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 SERPINB6P35237 376 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 ELK3P41970 407 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 SLCO1A2P46721 670 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 TUBP50607 506 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 RING1Q06587 406 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 ZBTB17Q13105 803 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 RASA2Q15283 850 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 RAB30Q15771 203 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 BBS9Q3SYG4 887 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 C5orf22Q49AR2 442 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 TMEM240Q5SV17 173 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 SYCP2LQ5T4T6 812 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 ARHGAP36Q6ZRI8 547 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 EXOC3L1Q86VI1 746 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 CYP4X1Q8N118 509 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 PDIK1LQ8N165 341 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 VPS52Q8N1B4 723 aa9.72□□□□□ -0.85
HNRNPC-223ENST00000556142 LZTR1Q8N653 840 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms