RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TFAP2DQ7Z6R9 452 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 CCDC117Q8IWD4 279 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-208ENST00000555905 YAF2Q8IY57 180 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 CFAP52Q8N1V2 620 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 RTL3Q8N8U3 475 aaKnown RBP11.35□□□□□ -0.59
TMEM260-208ENST00000555905 DDI1Q8WTU0 396 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 C1orf54Q8WWF1 131 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 MAGOHBQ96A72 148 aaKnown RBP11.35□□□□□ -0.59
TMEM260-208ENST00000555905 HAUS1Q96CS2 278 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 ETNK2Q9NVF9 386 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 TMEM248Q9NWD8 314 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 DUS2Q9NX74 493 aaKnown RBP11.35□□□□□ -0.59
TMEM260-208ENST00000555905 NEU3Q9UQ49 428 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 RAD54BQ9Y620 910 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 DOCK8Q8NF50 2099 aa11.35□□□□□ -0.59
TMEM260-208ENST00000555905 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 A0A1B0GVM2 712 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 TCAF2A6NFQ2 919 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 MCF2LO15068 1137 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 NCAM2O15394 837 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 MBTPS2O43462 519 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 TBL1XO60907 577 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 PHF2O75151 1096 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 CNTN5O94779 1100 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 FCARP24071 287 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 CHRNA3P32297 505 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 MAPKAPK2P49137 400 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 RPS24P62847 133 aaKnown RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 OTUD4Q01804 1114 aaKnown RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 GBE1Q04446 702 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 C2orf54Q08AI8 447 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 ZNF177Q13360 481 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 SIX1Q15475 284 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 ALFQ53S48 1182 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 TANGO2Q6ICL3 276 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 NPNTQ6UXI9 565 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 TPGS1Q6ZTW0 290 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 NLRP14Q86W24 1093 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 CIR1Q86X95 450 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 PRELID2Q8N945 189 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 RIN3Q8TB24 985 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 ACTL9Q8TC94 416 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 OSCP1Q8WVF1 389 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 ATG4AQ8WYN0 398 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 ELSPBP1Q96BH3 223 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 RSPRY1Q96DX4 576 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 MYEOVQ96EZ4 313 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 PRICKLE1Q96MT3 831 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 RUNDC3BQ96NL0 473 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 RBM12Q9NTZ6 932 aaKnown RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 EPS15L1Q9UBC2 864 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 SAE1Q9UBE0 346 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 FAM50BQ9Y247 325 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 R3HDM2Q9Y2K5 976 aaKnown RBP11.34□□□□□ -0.59
TMEM260-208ENST00000555905 NR2E1Q9Y466 385 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 MFHAS1Q9Y4C4 1052 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 WNT6Q9Y6F9 365 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 BRWD1Q9NSI6 2320 aa11.34□□□□□ -0.59
TMEM260-208ENST00000555905 H7C0C1 242 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 GFRA2O00451 464 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 PPP1R12AO14974 1030 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 LIASO43766 372 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 MFSD11O43934 449 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 ECI2O75521 394 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 ZNF189O75820 626 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 SLU7O95391 586 aaKnown RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 ADH1CP00326 375 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 PECAM1P16284 738 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 MX2P20592 715 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 OR1E1P30953 314 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 ATP5OP48047 213 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 IRAK1P51617 712 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 SGSHP51688 502 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 NDST2P52849 883 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 EIF3EP60228 445 aaKnown RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 XRCC4Q13426 336 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 SNX1Q13596 522 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 CDH18Q13634 790 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 BYSLQ13895 437 aaKnown RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 PDK1Q15118 436 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 NOMO1Q15155 1222 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 PDGFRLQ15198 375 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 CYP1B1Q16678 543 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 PUS10Q3MIT2 529 aaKnown RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 LEXMQ3ZCV2 418 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 MPP7Q5T2T1 576 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 ARTNQ5T4W7 220 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 C6orf118Q5T5N4 469 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 CCDC70Q6NSX1 233 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 DRICH1Q6PGQ1 229 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 MFSD6LQ8IWD5 586 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 KLHL7Q8IXQ5 586 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 ZDHHC14Q8IZN3 488 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 UMODL1-AS1Q8N2C9 162 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 CARNMT1Q8N4J0 409 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 C12orf50Q8NA57 414 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 DEPDC1BQ8WUY9 529 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 IRF7Q92985 503 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 ATP2A3Q93084 1043 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms