RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FAM90A20PA6NIJ5 464 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 MBD3L5A6NJ08 208 aaPredicted RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 B9A039 149 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 POC1B-GALNT4F8VUJ3 575 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 EXOC3O60645 756 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 C1RP00736 705 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 CYP3A4P08684 503 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 IGFBP2P18065 325 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 SERPINA4P29622 427 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 THBS4P35443 961 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 JAK3P52333 1124 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 COPB1P53618 953 aaKnown RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 PRKAA2P54646 552 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 RPL15P61313 204 aaKnown RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 SETQ01105 290 aaPredicted RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 TLE3Q04726 772 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 BIRC3Q13489 604 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 CBFBQ13951 182 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 LARS2Q15031 903 aaKnown RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 TAF5Q15542 800 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 SMAD1Q15797 465 aaKnown RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 GALNTL6Q49A17 601 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 AKNAD1Q5T1N1 836 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 DGAT2L7PQ6IED9 249 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 TMED8Q6PL24 325 aaPredicted RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 CYP26C1Q6V0L0 522 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 ZNF354CQ86Y25 554 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 HERC6Q8IVU3 1022 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 FTSJ3Q8IY81 847 aaKnown RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 C16orf71Q8IYS4 520 aaPredicted RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 GALNT4Q8N4A0 578 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 SLC2A12Q8TD20 617 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 ADAMTS18Q8TE60 1221 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 HMGB4Q8WW32 186 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 C3orf49Q96BT1 292 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 TRMT61AQ96FX7 289 aaKnown RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 HIC2Q96JB3 615 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 FYTTD1Q96QD9 318 aaKnown RBP3.8□□□□□ -1.8
SRP54-209ENST00000555746 NPAS1Q99742 590 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 CCDC134Q9H6E4 229 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 TMLHEQ9NVH6 421 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 FEM1BQ9UK73 627 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 PCDHB2Q9Y5E7 798 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 PLCH1Q4KWH8 1693 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 EHBP1L1Q8N3D4 1523 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 VIRMAQ69YN4 1812 aaKnown RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 DHX29Q7Z478 1369 aaKnown RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 AOX1Q06278 1338 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 CYP3A7-CYP3A51PA0A087WV96 503 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 HMX3A6NHT5 357 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 C3orf70A6NLC5 250 aaPredicted RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 M0QYT0 321 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 CLIC1O00299 241 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 FYB1O15117 783 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 IGLV2-14P01704 120 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 TFRCP02786 760 aaKnown RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 TK1P04183 234 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 CHRM5P08912 532 aaPredicted RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 HSPA8P11142 646 aaKnown RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 PTMSP20962 102 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 SFPQP23246 707 aaKnown RBP eCLIP3.79□□□□□ -1.8
SRP54-209ENST00000555746 CYP3A7P24462 503 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 ELLP55199 621 aaPredicted RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 FOXL2P58012 376 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 FAM3BP58499 235 aaPredicted RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 ACTR2P61160 394 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 WDR5P61964 334 aaKnown RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 IRX6P78412 446 aaPredicted RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 CUL4BQ13620 913 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 DCTN1Q14203 1278 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 MFSD13AQ14CX5 517 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 RPS6KA2Q15349 733 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 SLC15A2Q16348 729 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 PROSER3Q2NL68 480 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 ADCK5Q3MIX3 580 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 HSP90AB4PQ58FF6 505 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 ZNF569Q5MCW4 686 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 SUMO4Q6EEV6 95 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 WDR93Q6P2C0 686 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 VSTM1Q6UX27 236 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 DCDC5Q6ZRR9 648 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 RRAGAQ7L523 313 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 ANKS1BQ7Z6G8 1248 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 AMIGO2Q86SJ2 522 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 LAS2Q8IYD9 372 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 RUBCNQ92622 972 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 P2RY11Q96G91 374 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 ELOVL1Q9BW60 279 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 ADGRE3Q9BY15 652 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 BRD8Q9H0E9 1235 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 TAF1DQ9H5J8 278 aaPredicted RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 SEPSECSQ9HD40 501 aaKnown RBP3.79□□□□□ -1.8
SRP54-209ENST00000555746 RASSF1Q9NS23 344 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 SAGE1Q9NXZ1 904 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 SH3BP4Q9P0V3 963 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 PGAP2Q9UHJ9 254 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 LZTS1Q9Y250 596 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 PREX2Q70Z35 1606 aa3.79□□□□□ -1.8
SRP54-209ENST00000555746 MEGF6O75095 1541 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms