RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 LMLNQ96KR4 655 aa15.93■□□□□ 0.14
SNX6-205ENST00000555648 RSPH9Q9H1X1 276 aaPredicted RBP15.93■□□□□ 0.14
SNX6-205ENST00000555648 PABPC3Q9H361 631 aaKnown RBP15.93■□□□□ 0.14
SNX6-205ENST00000555648 MTG2Q9H4K7 406 aa15.93■□□□□ 0.14
SNX6-205ENST00000555648 GAREM1Q9H706 876 aa15.93■□□□□ 0.14
SNX6-205ENST00000555648 SIX2Q9NPC8 291 aa15.93■□□□□ 0.14
SNX6-205ENST00000555648 RRN3Q9NYV6 651 aa15.93■□□□□ 0.14
SNX6-205ENST00000555648 INTS6Q9UL03 887 aaKnown RBP15.93■□□□□ 0.14
SNX6-205ENST00000555648 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.93■□□□□ 0.14
SNX6-205ENST00000555648 LRRC72A6NJI9 287 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 M0QYT0 321 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 SH3BP5O60239 455 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 DAB1O75553 588 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 RNASEH2AO75792 299 aaKnown RBP15.92■□□□□ 0.14
SNX6-205ENST00000555648 TRIM16O95361 564 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 ERBB2P04626 1255 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 PNMA6AP0CW24 399 aaPredicted RBP15.92■□□□□ 0.14
SNX6-205ENST00000555648 CD59P13987 128 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 NOS2P35228 1153 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 CLCN1P35523 988 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 CST6Q15828 149 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 OLFML1Q6UWY5 402 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 SLC26A9Q7LBE3 791 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 MMAAQ8IVH4 418 aaKnown RBP15.92■□□□□ 0.14
SNX6-205ENST00000555648 NAXDQ8IW45 347 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 FAM71AQ8IYT1 594 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 APCDD1Q8J025 514 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 CCAR2Q8N163 923 aaKnown RBP15.92■□□□□ 0.14
SNX6-205ENST00000555648 SETD7Q8WTS6 366 aaKnown RBP15.92■□□□□ 0.14
SNX6-205ENST00000555648 SKA1Q96BD8 255 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 PLCB1Q9NQ66 1216 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 PAXBP1Q9Y5B6 917 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 PLXND1Q9Y4D7 1925 aa15.92■□□□□ 0.14
SNX6-205ENST00000555648 A0A1B0GVT2 93 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 A0A1W2PP55 124 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 TTC34A8MYJ7 566 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 MID1O15344 667 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 SPINK2P20155 84 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 EEF1GP26641 437 aaKnown RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 CD27P26842 260 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 SLC8A1P32418 973 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 CTSOP43234 321 aaPredicted RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 PSMD8P48556 350 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 CSNK1EP49674 416 aaKnown RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 AUHQ13825 339 aaKnown RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 ARID5BQ14865 1188 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 SUZ12Q15022 739 aaKnown RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 TRIP6Q15654 476 aaKnown RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 ZNF423Q2M1K9 1284 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 HLA-BQ31612 363 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 ACCSLQ4AC99 568 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 PTPN20Q4JDL3 420 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 KLHDC7AQ5VTJ3 777 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 TAF3Q5VWG9 929 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 KIAA0895LQ68EN5 471 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 FBXL22Q6P050 247 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 ERICH1Q86X53 443 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 CIR1Q86X95 450 aaPredicted RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 ZNF397Q8NF99 534 aaPredicted RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 BIRC7Q96CA5 298 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 C18orf8Q96DM3 657 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 MYO19Q96H55 970 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 RPL10LQ96L21 214 aaKnown RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 MRGPRX3Q96LB0 322 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 SCNM1Q9BWG6 230 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 ADAM33Q9BZ11 813 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 SIK2Q9H0K1 926 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 WDCPQ9H6R7 721 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 TMEM51Q9NW97 253 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.91■□□□□ 0.14
SNX6-205ENST00000555648 SLCO3A1Q9UIG8 710 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 SLC25A13Q9UJS0 675 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 AJAP1Q9UKB5 411 aaPredicted RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 VANGL2Q9ULK5 521 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 FHOD1Q9Y613 1164 aa15.91■□□□□ 0.14
SNX6-205ENST00000555648 TPRP12270 2363 aaKnown RBP15.91■□□□□ 0.14
SNX6-205ENST00000555648 ADH1BP00325 375 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 F9P00740 461 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 IL1BP01584 269 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 CYP11B1P15538 503 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 SULT1E1P49888 294 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 C21orf59P57076 290 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 MIIPQ5JXC2 388 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 C9orf64Q5T6V5 341 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 FAM102AQ5T9C2 384 aaPredicted RBP15.9■□□□□ 0.14
SNX6-205ENST00000555648 UNQ6494/PRO21346Q6UXR6 183 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 DSG4Q86SJ6 1040 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 STK40Q8N2I9 435 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 CAMK1GQ96NX5 476 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 GBP4Q96PP9 640 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 PRMT1Q99873 361 aaKnown RBP15.9■□□□□ 0.14
SNX6-205ENST00000555648 TM9SF3Q9HD45 589 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 TM7SF3Q9NS93 570 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 SAMSN1Q9NSI8 373 aaKnown RBP15.9■□□□□ 0.14
SNX6-205ENST00000555648 VPS28Q9UK41 221 aa15.9■□□□□ 0.14
SNX6-205ENST00000555648 HYAL3O43820 417 aaPredicted RBP15.89■□□□□ 0.13
SNX6-205ENST00000555648 PAGE1O75459 146 aa15.89■□□□□ 0.13
SNX6-205ENST00000555648 CLDN11O75508 207 aa15.89■□□□□ 0.13
SNX6-205ENST00000555648 GJB3O75712 270 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms