RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ACVRL1P37023 503 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 CDH18Q13634 790 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 LINGO4Q6UY18 593 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 ARHGEF18Q6ZSZ5 1173 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 ATPAF2Q8N5M1 289 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 GRK7Q8WTQ7 553 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 MRRFQ96E11 262 aaKnown RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 GAS2L1Q99501 681 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 APOL2Q9BQE5 337 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 ARGLU1Q9NWB6 273 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 COMMD8Q9NX08 183 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 A0A0D9SEW6 157 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 NEDD8-MDP1E9PL57 170 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 GLP2RO95838 553 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 IGLV3-25P01717 112 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 RPL21P46778 160 aaKnown RBP10.47□□□□□ -0.73
NEK9-205ENST00000555405 MAXP61244 160 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 GRM2Q14416 872 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 NOMO1Q15155 1222 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 ADGRF1Q5T601 910 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 FBXO38Q6PIJ6 1188 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 FGF13Q92913 245 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 USP13Q92995 863 aaPredicted RBP10.47□□□□□ -0.73
NEK9-205ENST00000555405 ERP44Q9BS26 406 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 LRRC3Q9BY71 257 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 RAB17Q9H0T7 212 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 SP110Q9HB58 689 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 HOMER3Q9NSC5 361 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 HSFX1Q9UBD0 423 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 ANAPC5Q9UJX4 755 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 NLRC5Q86WI3 1866 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 CCDC78A2IDD5 438 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 RAMP2O60895 175 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 SERPINB6P35237 376 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 PAPOLAP51003 745 aaKnown RBP10.47□□□□□ -0.73
NEK9-205ENST00000555405 SPARCL1Q14515 664 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 POLD3Q15054 466 aaPredicted RBP10.47□□□□□ -0.73
NEK9-205ENST00000555405 PDK1Q15118 436 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 IZUMO3Q5VZ72 239 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 KNL1Q8NG31 2342 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 FAF2Q96CS3 445 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 EXOC2Q96KP1 924 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 FERMT1Q9BQL6 677 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 OSBPL2Q9H1P3 480 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 LRRC19Q9H756 370 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 SFXN1Q9H9B4 322 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 KIF9Q9HAQ2 790 aa10.47□□□□□ -0.73
NEK9-205ENST00000555405 TRIM24O15164 1050 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 APRTP07741 180 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 RHOCP08134 193 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 HNRNPA1P09651 372 aaKnown RBP eCLIP10.46□□□□□ -0.73
NEK9-205ENST00000555405 BMP8BP34820 402 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 PPP3CCP48454 512 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 TMEM25Q86YD3 366 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 GPR65Q8IYL9 337 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 FBXO25Q8TCJ0 367 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 OVCA2Q8WZ82 227 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 HMCESQ96FZ2 354 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 P2RY11Q96G91 374 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 BBS2Q9BXC9 721 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 ZDHHC7Q9NXF8 308 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 J3KR12 359 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 PPP1R12AO14974 1030 aaPredicted RBP10.46□□□□□ -0.73
NEK9-205ENST00000555405 USP12O75317 370 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 MOSPD3O75425 235 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 C1RP00736 705 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 FAM153BP0C7A2 387 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 TGM2P21980 687 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 RPL22P35268 128 aaKnown RBP10.46□□□□□ -0.73
NEK9-205ENST00000555405 FNTAP49354 379 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 FAM153CQ494X1 144 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 FAM133BQ5BKY9 247 aaKnown RBP10.46□□□□□ -0.73
NEK9-205ENST00000555405 RABGAP1LQ5R372 815 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 RNF219Q5W0B1 726 aaPredicted RBP10.46□□□□□ -0.73
NEK9-205ENST00000555405 SYCE2Q6PIF2 218 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 MFN1Q8IWA4 741 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 CENPHQ9H3R5 247 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 FAM153AQ9UHL3 310 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 IPO11Q9UI26 975 aaKnown RBP10.46□□□□□ -0.73
NEK9-205ENST00000555405 VPS28Q9UK41 221 aa10.46□□□□□ -0.73
NEK9-205ENST00000555405 MYO16Q9Y6X6 1858 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 SMIM23A6NLE4 172 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 GOLGA8CPA6NN73 597 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 RASA4BC9J798 803 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 RNF103O00237 685 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 CTIFO43310 598 aaKnown RBP10.46□□□□□ -0.74
NEK9-205ENST00000555405 RASA4O43374 803 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 GLDCP23378 1020 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 PTGIRP43119 386 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 ITGA8P53708 1063 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 DPYSQ14117 519 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 ACCSLQ4AC99 568 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 SLC9A4Q6AI14 798 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 BEND5Q7L4P6 421 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 HTR3CQ8WXA8 447 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 KXD1Q9BQD3 176 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 KLC2Q9H0B6 622 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 LMAN2LQ9H0V9 348 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 EBF3Q9H4W6 596 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 ATP13A1Q9HD20 1204 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms