RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 ALG14Q96F25 216 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 MYO19Q96H55 970 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 PEBP4Q96S96 227 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 GABRG3Q99928 467 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 CNPY3Q9BT09 278 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
SYNE2-214ENST00000554928 CD93Q9NPY3 652 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 SPTLC3Q9NUV7 552 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 PARVAQ9NVD7 372 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 ZNF212Q9UDV6 495 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 USP34Q70CQ2 3546 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 IGLV3-10A0A075B6K4 115 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 A0A1B0GVM2 712 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 TCRBV21S2A2A0A5A6 115 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 TCAF2A6NFQ2 919 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 AKR1B15C9JRZ8 316 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-214ENST00000554928 H0Y626 953 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 APBB3O95704 486 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 PSMA2P25787 234 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 HOXA6P31267 233 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 ENPP2Q13822 863 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 LPAL2Q16609 132 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 CA9Q16790 459 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 PLEKHG6Q3KR16 790 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 PREPLQ4J6C6 727 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-214ENST00000554928 EOGTQ5NDL2 527 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 RABGAP1LQ5R372 815 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 SCYL2Q6P3W7 929 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 CYP4V2Q6ZWL3 525 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-214ENST00000554928 WDR5BQ86VZ2 330 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 LONP2Q86WA8 852 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 RASSF3Q86WH2 238 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 DRC7Q8IY82 874 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 AHI1Q8N157 1196 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 WFIKKN2Q8TEU8 576 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 TTC17Q96AE7 1141 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 FAM122AQ96E09 287 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 MRFAP1L1Q96HT8 127 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 MRGPRX3Q96LB0 322 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 C1orf74Q96LT6 269 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 HAPLN3Q96S86 360 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 NDFIP2Q9NV92 336 aa12.73□□□□□ -0.37
SYNE2-214ENST00000554928 MUC22E2RYF6 1773 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-214ENST00000554928 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
SYNE2-214ENST00000554928 TYW5A2RUC4 315 aaKnown RBP12.72□□□□□ -0.37
SYNE2-214ENST00000554928 AXIN1O15169 862 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 LRIG2O94898 1065 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 CYP1A2P05177 515 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 GABRG2P18507 467 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 STK19P49842 368 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-214ENST00000554928 DGKEP52429 567 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 EIF4HQ15056 248 aaKnown RBP12.72□□□□□ -0.37
SYNE2-214ENST00000554928 SLC18A3Q16572 532 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 HSF5Q4G112 596 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-214ENST00000554928 PPP1R2P3Q6NXS1 205 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 NUDT18Q6ZVK8 323 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 SUMF1Q8NBK3 374 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 CCDC26Q8TAB7 109 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 HMGB4Q8WW32 186 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 ATRIPQ8WXE1 791 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 RLN3Q8WXF3 142 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 NTAN1Q96AB6 310 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 PSMB7Q99436 277 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 NUP85Q9BW27 656 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 NHEJ1Q9H9Q4 299 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-214ENST00000554928 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 FZD10Q9ULW2 581 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 OR51B4Q9Y5P0 310 aa12.72□□□□□ -0.37
SYNE2-214ENST00000554928 A0A0D9SEW6 157 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 SSU72P8A0A1W2PR75 194 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 PRR23AA6NEV1 266 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 PROB1E7EW31 1015 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 SNAP91O60641 907 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 LRCH4O75427 683 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 DLDP09622 509 aaKnown RBP12.71□□□□□ -0.37
SYNE2-214ENST00000554928 MYBL1P10243 752 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 POLR2EP19388 210 aaKnown RBP12.71□□□□□ -0.37
SYNE2-214ENST00000554928 NDUFV2P19404 249 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 BCKDHBP21953 392 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 GLDCP23378 1020 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 IL1R2P27930 398 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 MIPP30301 263 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 CDH4P55283 916 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 SCAPQ12770 1279 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.37
SYNE2-214ENST00000554928 TTC39BQ5VTQ0 682 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-214ENST00000554928 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-214ENST00000554928 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 TRMT11Q7Z4G4 463 aaKnown RBP12.71□□□□□ -0.37
SYNE2-214ENST00000554928 SLFN11Q7Z7L1 901 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 VPS36Q86VN1 386 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 NLRP14Q86W24 1093 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 CACUL1Q86Y37 369 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 CNGA4Q8IV77 575 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 CAMKK1Q8N5S9 505 aa12.71□□□□□ -0.37
SYNE2-214ENST00000554928 FAM160A2Q8N612 972 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms