RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 BBS7Q8IWZ6 715 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 ZDHHC14Q8IZN3 488 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 DEFB123Q8N688 67 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 ATL2Q8NHH9 583 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 SLC35B2Q8TB61 432 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 BPIFB1Q8TDL5 484 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 ATG4AQ8WYN0 398 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 SUSD6Q92537 303 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 IGSF8Q969P0 613 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 TMA16Q96EY4 203 aaKnown RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 PRICKLE1Q96MT3 831 aaPredicted RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 KRT12Q99456 494 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 DDX47Q9H0S4 455 aaKnown RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 UBE2ZQ9H832 354 aaPredicted RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 ZFP14Q9HCL3 533 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 ETNK2Q9NVF9 386 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 DTLQ9NZJ0 730 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 MPP6Q9NZW5 540 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 PCYOX1Q9UHG3 505 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 ZNF148Q9UQR1 794 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 NR2E1Q9Y466 385 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 MYO9BQ13459 2157 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-206ENST00000554685 FAM187AA6NFU0 413 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 GFRA2O00451 464 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 ECEL1O95672 775 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 ITGAVP06756 1048 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 RBP3P10745 1247 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 OR1E1P30953 314 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 ETFBP38117 255 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 IFNAR2P48551 515 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 OXCT1P55809 520 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 ZNF33AQ06730 810 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 ZNF177Q13360 481 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-206ENST00000554685 SMAD4Q13485 552 aaKnown RBP14.76□□□□□ -0.05
SHOX2-206ENST00000554685 SNX1Q13596 522 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 TEX35Q5T0J7 233 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 NPNTQ6UXI9 565 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 MTSS1LQ765P7 747 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 SETD3Q86TU7 594 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-206ENST00000554685 UMODL1-AS1Q8N2C9 162 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 UBXN4Q92575 508 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 SLCO2A1Q92959 643 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 CCDC114Q96M63 670 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 POMKQ9H5K3 350 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 DNPEPQ9ULA0 475 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 USP15Q9Y4E8 981 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-206ENST00000554685 LAMA3Q16787 3333 aa14.76□□□□□ -0.05
SHOX2-206ENST00000554685 HELZP42694 1942 aaKnown RBP14.76□□□□□ -0.05
SHOX2-206ENST00000554685 PRRC2BQ5JSZ5 2229 aaKnown RBP14.76□□□□□ -0.05
SHOX2-206ENST00000554685 C2orf16Q68DN1 1984 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 ARHGAP42A6NI28 874 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 HEPACAM2A8MVW5 462 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 MTSS1O43312 755 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 TSPAN3O60637 253 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 RAMP2O60895 175 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 TBL1XO60907 577 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 CNTN5O94779 1100 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 LAMP2P13473 410 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 STIP1P31948 543 aaKnown RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 DR1Q01658 176 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 GALNT2Q10471 571 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 PDGFRLQ15198 375 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 OASLQ15646 514 aaKnown RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 PARP15Q460N3 678 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 ALFQ53S48 1182 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 SLC45A4Q5BKX6 768 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 ARTNQ5T4W7 220 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 DARS2Q6PI48 645 aaKnown RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 ZNF783Q6ZMS7 281 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 Q7L0L9 218 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 GSTA5Q7RTV2 222 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 TFAP2DQ7Z6R9 452 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 ATPAF2Q8N5M1 289 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 NOA1Q8NC60 698 aaKnown RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 CCHCR1Q8TD31 782 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 DDI1Q8WTU0 396 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 DEPDC1BQ8WUY9 529 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 OSCP1Q8WVF1 389 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 TFB1MQ8WVM0 346 aaKnown RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 RSAD2Q8WXG1 361 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 HDAC11Q96DB2 347 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 OLFM3Q96PB7 478 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 QKIQ96PU8 341 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 MYADMQ96S97 322 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 DUS2Q9NX74 493 aaKnown RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 SAE1Q9UBE0 346 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 CDH22Q9UJ99 828 aa14.75□□□□□ -0.05
SHOX2-206ENST00000554685 NUP210Q8TEM1 1887 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-206ENST00000554685 ILVBLA1L0T0 632 aa14.74□□□□□ -0.05
SHOX2-206ENST00000554685 BCLAF3A2AJT9 711 aaKnown RBP14.74□□□□□ -0.05
SHOX2-206ENST00000554685 H0Y626 953 aa14.74□□□□□ -0.05
SHOX2-206ENST00000554685 TRDMT1O14717 391 aaKnown RBP14.74□□□□□ -0.05
SHOX2-206ENST00000554685 STK10O94804 968 aaKnown RBP14.74□□□□□ -0.05
SHOX2-206ENST00000554685 LUC7L3O95232 432 aaKnown RBP14.74□□□□□ -0.05
SHOX2-206ENST00000554685 NFATC1O95644 943 aa14.74□□□□□ -0.05
SHOX2-206ENST00000554685 RHOCP08134 193 aa14.74□□□□□ -0.05
SHOX2-206ENST00000554685 KCNA5P22460 613 aa14.74□□□□□ -0.05
SHOX2-206ENST00000554685 ACTN2P35609 894 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms