RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 PCDHB4Q9Y5E5 795 aa25.08■■□□□ 1.61
FOXA1-204ENST00000554607 PLK4O00444 970 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 WNT1P04628 370 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 GOT1P17174 413 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 COBLL1Q53SF7 1204 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 MS4A13Q5J8X5 152 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 PITRM1Q5JRX3 1037 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 RNF219Q5W0B1 726 aaPredicted RBP25.07■■□□□ 1.6
FOXA1-204ENST00000554607 SLC35C1Q96A29 364 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 FCRL2Q96LA5 508 aaPredicted RBP25.07■■□□□ 1.6
FOXA1-204ENST00000554607 DCBLD2Q96PD2 775 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 GOLPH3LQ9H4A5 285 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 CEP83Q9Y592 693 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 ATP6V1DQ9Y5K8 247 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 ITIH6Q6UXX5 1313 aa25.07■■□□□ 1.6
FOXA1-204ENST00000554607 PLXNA2O75051 1894 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 A0A1W2PR77 199 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 LUC7L3O95232 432 aaKnown RBP25.06■■□□□ 1.6
FOXA1-204ENST00000554607 ADH1BP00325 375 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 C5AR1P21730 350 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 ECT2LQ008S8 904 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 KCNJ12Q14500 433 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 ZNF658Q5TYW1 1059 aaPredicted RBP25.06■■□□□ 1.6
FOXA1-204ENST00000554607 ANKRD40Q6AI12 368 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 OXR1Q8N573 874 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 CLEC4CQ8WTT0 213 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 NT5C1BQ96P26 610 aa25.06■■□□□ 1.6
FOXA1-204ENST00000554607 UBL7Q96S82 380 aaPredicted RBP25.06■■□□□ 1.6
FOXA1-204ENST00000554607 METTL14Q9HCE5 456 aaKnown RBP25.06■■□□□ 1.6
FOXA1-204ENST00000554607 TTC34A8MYJ7 566 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 C10orf142B7Z368 130 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 SART1O43290 800 aaKnown RBP25.05■■□□□ 1.6
FOXA1-204ENST00000554607 NNMTP40261 264 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 LRRC63Q05C16 580 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 SHBQ15464 509 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 DCAF6Q58WW2 860 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 FSCBQ5H9T9 825 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 EID2Q8N6I1 236 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 OR14C36Q8NHC7 312 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 DQX1Q8TE96 717 aaKnown RBP25.05■■□□□ 1.6
FOXA1-204ENST00000554607 SLC39A13Q96H72 371 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 SERAC1Q96JX3 654 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 FAM129BQ96TA1 746 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 TRIM62Q9BVG3 475 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 GTPBP4Q9BZE4 634 aaKnown RBP25.05■■□□□ 1.6
FOXA1-204ENST00000554607 MIS12Q9H081 205 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 NUCKS1Q9H1E3 243 aaKnown RBP25.05■■□□□ 1.6
FOXA1-204ENST00000554607 ERVMER34-1Q9H9K5 563 aa25.05■■□□□ 1.6
FOXA1-204ENST00000554607 TP53BP1Q12888 1972 aaPredicted RBP25.04■■□□□ 1.6
FOXA1-204ENST00000554607 TLR4O00206 839 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 PMM2O15305 246 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 CTSOP43234 321 aaPredicted RBP25.04■■□□□ 1.6
FOXA1-204ENST00000554607 PSMD8P48556 350 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 FMO5P49326 533 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 CETN1Q12798 172 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 DNAJC3Q13217 504 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 LRRC69Q6ZNQ3 347 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 MMS22LQ6ZRQ5 1243 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 CFAP52Q8N1V2 620 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 PPM1KQ8N3J5 372 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 MYEOVQ96EZ4 313 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 GSDMAQ96QA5 445 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 SLCO3A1Q9UIG8 710 aa25.04■■□□□ 1.6
FOXA1-204ENST00000554607 RNF225M0QZC1 329 aaPredicted RBP25.03■■□□□ 1.6
FOXA1-204ENST00000554607 FYNP06241 537 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 BRD2P25440 801 aaKnown RBP25.03■■□□□ 1.6
FOXA1-204ENST00000554607 EPHA8P29322 1005 aaPredicted RBP25.03■■□□□ 1.6
FOXA1-204ENST00000554607 RXRGP48443 463 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 ACADVLP49748 655 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 ADPRHP54922 357 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 NXPH1P58417 271 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 NUCB2P80303 420 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 ILKQ13418 452 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 PNOCQ13519 176 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 BEND5Q7L4P6 421 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 STK40Q8N2I9 435 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 AADATQ8N5Z0 425 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 FAM149B1Q96BN6 582 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 ZSWIM1Q9BR11 485 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 NRSN2Q9GZP1 204 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 TJP2Q9UDY2 1190 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 NAALADL1Q9UQQ1 740 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 ZDHHC9Q9Y397 364 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 AK5Q9Y6K8 562 aa25.03■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3DA0A087WVF3 549 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3IA0A087WXS9 549 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3EA0A087X179 549 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3KA0A087X1G2 549 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3FA6NER0 549 aaPredicted RBP25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3LB9A6J9 549 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 CBX4O00257 560 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 MAGEC1O60732 1142 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 MOCS2O96007 188 aaPredicted RBP25.02■■□□□ 1.6
FOXA1-204ENST00000554607 IL1BP01584 269 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 APOEP02649 317 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3HP0C7X1 549 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 NUDT1P36639 197 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TARDBPQ13148 414 aaKnown RBP eCLIP25.02■■□□□ 1.6
FOXA1-204ENST00000554607 SLC12A1Q13621 1099 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 ELAVL3Q14576 367 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms