RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 SIN3BO75182 1162 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 GRAP2O75791 330 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 ERBB2P04626 1255 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 MATKP42679 507 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 CTSOP43234 321 aaPredicted RBP11.48□□□□□ -0.57
ABCD4-221ENST00000554453 GABRB2P47870 512 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 BNC1Q01954 994 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 SULT2A1Q06520 285 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 TTC31Q49AM3 519 aaPredicted RBP11.48□□□□□ -0.57
ABCD4-221ENST00000554453 C5orf22Q49AR2 442 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 IL27RAQ6UWB1 636 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 OLFML1Q6UWY5 402 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 DBX2Q6ZNG2 339 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 FAM183BPQ6ZVS7 135 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 PASD1Q8IV76 773 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 CCAR2Q8N163 923 aaKnown RBP11.48□□□□□ -0.57
ABCD4-221ENST00000554453 TMEM35BQ8NCS4 154 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 ENOX1Q8TC92 643 aaKnown RBP11.48□□□□□ -0.57
ABCD4-221ENST00000554453 RNF34Q969K3 372 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 C18orf8Q96DM3 657 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 ALG14Q96F25 216 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 FAM129BQ96TA1 746 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 NAA15Q9BXJ9 866 aaKnown RBP11.48□□□□□ -0.57
ABCD4-221ENST00000554453 STK33Q9BYT3 514 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 C6orf106Q9H6K1 298 aaPredicted RBP11.48□□□□□ -0.57
ABCD4-221ENST00000554453 DDIT4Q9NX09 232 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 ITIH6Q6UXX5 1313 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 ASXL3Q9C0F0 2248 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 ACACAQ13085 2346 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 EDDM13A0A1B0GTR0 161 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 A0A1B0GVM2 712 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 TCAF2A6NFQ2 919 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 SH3BP5O60239 455 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 SEMA4FO95754 770 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 ZNF883P0CG24 379 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 UCHL3P15374 230 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 CYP11B1P15538 503 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 EEF1GP26641 437 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 RDXP35241 583 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 SCNN1AP37088 669 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 NNMTP40261 264 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 CSNK1EP49674 416 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 GALCP54803 685 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 FAM193AP78312 1265 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 SIM1P81133 766 aaPredicted RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 FOXC1Q12948 553 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 GRIK2Q13002 908 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 AUHQ13825 339 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 KCNJ12Q14500 433 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 ST3GAL2Q16842 350 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 TCP11X2Q5H9J9 407 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 RABGAP1LQ5R372 815 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 TTC39BQ5VTQ0 682 aaPredicted RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 CACUL1Q86Y37 369 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 DHX40Q8IX18 779 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 ZCCHC9Q8N567 271 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 PTPRN2Q92932 1015 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 IGSF8Q969P0 613 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 NT5C3BQ969T7 300 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 BIRC7Q96CA5 298 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 RPL10LQ96L21 214 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 NPY6RQ99463 290 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 NEUROG2Q9H2A3 272 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 PABPC3Q9H361 631 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 FAM204AQ9H8W3 233 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 PLCB1Q9NQ66 1216 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 FBXL12Q9NXK8 326 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 ADAMTS1Q9UHI8 967 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 CEP83Q9Y592 693 aa11.47□□□□□ -0.57
ABCD4-221ENST00000554453 URB1O60287 2271 aaKnown RBP11.47□□□□□ -0.57
ABCD4-221ENST00000554453 SYNJ2BP-COX16A0A087WUM0 186 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.46□□□□□ -0.57
ABCD4-221ENST00000554453 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 A0A1B0GVT2 93 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 C10orf142B7Z368 130 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 M0QYT0 321 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 PAGE1O75459 146 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 DAB1O75553 588 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 TRIM16O95361 564 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 TOP3BO95985 862 aaKnown RBP11.46□□□□□ -0.57
ABCD4-221ENST00000554453 F9P00740 461 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 PNMA6AP0CW24 399 aaPredicted RBP11.46□□□□□ -0.57
ABCD4-221ENST00000554453 CD27P26842 260 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 MZF1P28698 734 aaPredicted RBP11.46□□□□□ -0.57
ABCD4-221ENST00000554453 SLC8A1P32418 973 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 CXCR3P49682 368 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 RNASE9P60153 205 aaKnown RBP11.46□□□□□ -0.57
ABCD4-221ENST00000554453 NME3Q13232 169 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 ZNF177Q13360 481 aaPredicted RBP11.46□□□□□ -0.57
ABCD4-221ENST00000554453 RAPGEF1Q13905 1077 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 TRIP6Q15654 476 aaKnown RBP11.46□□□□□ -0.57
ABCD4-221ENST00000554453 CST6Q15828 149 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 HLA-BQ31612 363 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 HSP90AA4PQ58FG1 418 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 BRMS1LQ5PSV4 323 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 KIAA0895LQ68EN5 471 aa11.46□□□□□ -0.57
ABCD4-221ENST00000554453 CXorf57Q6NSI4 855 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms