RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ABCB4P21439 1286 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 SNX16P57768 344 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 CAMK4Q16566 473 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 EXOC3L4Q17RC7 722 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 KIF19Q2TAC6 998 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 C9orf64Q5T6V5 341 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 KIAA0895LQ68EN5 471 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 DBX2Q6ZNG2 339 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 ADAT2Q7Z6V5 191 aaKnown RBP19.39■□□□□ 0.69
CPSF2-203ENST00000554290 RNF34Q969K3 372 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 NOX5Q96PH1 765 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 CDC6Q99741 560 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 OMDQ99983 421 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 FAM204AQ9H8W3 233 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 SNX11Q9Y5W9 270 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 SLCO1B1Q9Y6L6 691 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 GTPBP10A4D1E9 387 aaKnown RBP19.38■□□□□ 0.69
CPSF2-203ENST00000554290 FAM47DPA6NHR8 397 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 LRRC72A6NJI9 287 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 BECN2A8MW95 431 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 TTC34A8MYJ7 566 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 CCR1P32246 355 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 CTSOP43234 321 aaPredicted RBP19.38■□□□□ 0.69
CPSF2-203ENST00000554290 MTIF2P46199 727 aaKnown RBP19.38■□□□□ 0.69
CPSF2-203ENST00000554290 OXCT1P55809 520 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 UBE2HP62256 183 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 PTK2Q05397 1052 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 MTA1Q13330 715 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 TAF5Q15542 800 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 RABGAP1LQ5R372 815 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 TTC39BQ5VTQ0 682 aaPredicted RBP19.38■□□□□ 0.69
CPSF2-203ENST00000554290 LRSAM1Q6UWE0 723 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 ITIH6Q6UXX5 1313 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 MMAAQ8IVH4 418 aaKnown RBP19.38■□□□□ 0.69
CPSF2-203ENST00000554290 APCDD1Q8J025 514 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 PNPLA1Q8N8W4 532 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 RHBDD1Q8TEB9 315 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 SHC3Q92529 594 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 IGSF8Q969P0 613 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 PPP1R13BQ96KQ4 1090 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 PPP1R9BQ96SB3 815 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 ASNSD1Q9NWL6 643 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 DDIT4Q9NX09 232 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 SLCO3A1Q9UIG8 710 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 FZD4Q9ULV1 537 aa19.38■□□□□ 0.69
CPSF2-203ENST00000554290 MID1O15344 667 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 DFNA5O60443 496 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 HSF2BPO75031 334 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 RNASEH2AO75792 299 aaKnown RBP19.37■□□□□ 0.69
CPSF2-203ENST00000554290 SLC8A1P32418 973 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 GALCP54803 685 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 RACK1P63244 317 aaKnown RBP19.37■□□□□ 0.69
CPSF2-203ENST00000554290 PITX1P78337 314 aaPredicted RBP19.37■□□□□ 0.69
CPSF2-203ENST00000554290 SULT2A1Q06520 285 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 EIF4EBP2Q13542 120 aaPredicted RBP19.37■□□□□ 0.69
CPSF2-203ENST00000554290 TPD52L1Q16890 204 aaPredicted RBP19.37■□□□□ 0.69
CPSF2-203ENST00000554290 DEFB106AQ8N104 65 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 CCAR2Q8N163 923 aaKnown RBP19.37■□□□□ 0.69
CPSF2-203ENST00000554290 MLKLQ8NB16 471 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 SKA1Q96BD8 255 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 RPL10LQ96L21 214 aaKnown RBP19.37■□□□□ 0.69
CPSF2-203ENST00000554290 SLC2A13Q96QE2 648 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 CPXM1Q96SM3 734 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 NEUROG2Q9H2A3 272 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 ADAMTS1Q9UHI8 967 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 PCDHGC3Q9UN70 934 aa19.37■□□□□ 0.69
CPSF2-203ENST00000554290 SYNJ2BP-COX16A0A087WUM0 186 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 A0A1B0GVM2 712 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 A0A1W2PP55 124 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 TCAF2A6NFQ2 919 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 SRRM3A6NNA2 597 aaPredicted RBP19.36■□□□□ 0.69
CPSF2-203ENST00000554290 ADH1BP00325 375 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 IGHV4-34P06331 123 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 PON1P27169 355 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 KRT9P35527 623 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 CCT8P50990 548 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 C21orf59P57076 290 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 NCEH1Q6PIU2 408 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 C11orf57Q6ZUT1 292 aaPredicted RBP19.36■□□□□ 0.69
CPSF2-203ENST00000554290 SLCO6A1Q86UG4 719 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 WDTC1Q8N5D0 677 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 OR2T34Q8NGX1 318 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 FAM129BQ96TA1 746 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 PRMT1Q99873 361 aaKnown RBP19.36■□□□□ 0.69
CPSF2-203ENST00000554290 ACE2Q9BYF1 805 aaPredicted RBP19.36■□□□□ 0.69
CPSF2-203ENST00000554290 COX16Q9P0S2 106 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 SERGEFQ9UGK8 458 aa19.36■□□□□ 0.69
CPSF2-203ENST00000554290 AKAP13Q12802 2813 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 A0A1W2PPC4 97 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 PDGFRAP16234 1089 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 C5AR1P21730 350 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 GRK6P43250 576 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 PSMD8P48556 350 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 APBA1Q02410 837 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 OR6B2Q6IFH4 312 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 SND1Q7KZF4 910 aaKnown RBP eCLIP19.35■□□□□ 0.69
CPSF2-203ENST00000554290 IRF2BP1Q8IU81 584 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 PASD1Q8IV76 773 aa19.35■□□□□ 0.69
CPSF2-203ENST00000554290 BAHD1Q8TBE0 780 aaPredicted RBP19.35■□□□□ 0.69
CPSF2-203ENST00000554290 SYNCQ9H7C4 482 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms