RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 ZBTB16Q05516 673 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 N4BP2L1Q5TBK1 243 aaPredicted RBP12.52□□□□□ -0.41
LRP1-207ENST00000554174 ATG14Q6ZNE5 492 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 TAC4Q86UU9 113 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 RASSF3Q86WH2 238 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 OR10T2Q8NGX3 314 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 SCAMP5Q8TAC9 235 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 AZIN2Q96A70 460 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 CELF6Q96J87 481 aaKnown RBP12.52□□□□□ -0.41
LRP1-207ENST00000554174 APOL2Q9BQE5 337 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 FERMT1Q9BQL6 677 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 EBF2Q9HAK2 575 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 GABRQQ9UN88 632 aa12.52□□□□□ -0.41
LRP1-207ENST00000554174 MRPL42Q9Y6G3 142 aaKnown RBP12.52□□□□□ -0.41
LRP1-207ENST00000554174 FCHO1O14526 889 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 SNNO75324 88 aaPredicted RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 AP2A1O95782 977 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 EZRP15311 586 aaKnown RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 CCND1P24385 295 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 CNTFP26441 200 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 GARSP41250 739 aaKnown RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 HCAR3P49019 387 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 FASTKD1Q53R41 847 aaKnown RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 KCTD11Q693B1 232 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 FAM171BQ6P995 826 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 MRPL10Q7Z7H8 261 aaKnown RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.51□□□□□ -0.41
LRP1-207ENST00000554174 ZSCAN18Q8TBC5 510 aaPredicted RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 CDKL2Q92772 493 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 CERS2Q96G23 380 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 ATXN7L3BQ96GX2 97 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 AGAP2Q99490 1192 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 PKMYT1Q99640 499 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 CADM1Q9BY67 442 aaKnown RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 TLE6Q9H808 572 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 UBP1Q9NZI7 540 aa12.51□□□□□ -0.41
LRP1-207ENST00000554174 TDRD15B5MCY1 1934 aaKnown RBP12.51□□□□□ -0.41
LRP1-207ENST00000554174 ITM2AO43736 263 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 LYPLA1O75608 230 aaPredicted RBP12.5□□□□□ -0.41
LRP1-207ENST00000554174 POLBP06746 335 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 KCNA4P22459 653 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 PCSK1P29120 753 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ABCG1P45844 678 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 RASSF2P50749 326 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 RPL10AP62906 217 aaKnown RBP12.5□□□□□ -0.41
LRP1-207ENST00000554174 GALNT2Q10471 571 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 CERCAMQ5T4B2 595 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ATG16L1Q676U5 607 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 PM20D1Q6GTS8 502 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 RFWD3Q6PCD5 774 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 CMC1Q7Z7K0 106 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 CCNJLQ8IV13 435 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 DPF3Q92784 378 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 MFSD3Q96ES6 412 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ZNF358Q9NW07 568 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ZFATQ9P243 1243 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 MCM8Q9UJA3 840 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 VANGL2Q9ULK5 521 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 INPP5FQ9Y2H2 1132 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ZCWPW2A0A1B0GU75 182 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 GPR182O15218 404 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 BIRC5O15392 142 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 KPNA6O60684 536 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 PEX11AO75192 247 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ODC1P11926 461 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 TPH1P17752 444 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 NFKB1P19838 968 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 YY1P25490 414 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 PDE1BQ01064 536 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ARL13BQ3SXY8 428 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
LRP1-207ENST00000554174 MBLAC2Q68D91 279 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ARHGAP36Q6ZRI8 547 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 RINLQ6ZS11 566 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 TRIM42Q8IWZ5 723 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ZNF669Q96BR6 464 aaPredicted RBP12.5□□□□□ -0.41
LRP1-207ENST00000554174 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ZNF419Q96HQ0 510 aaPredicted RBP12.5□□□□□ -0.41
LRP1-207ENST00000554174 ZNF778Q96MU6 729 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 ZIC5Q96T25 663 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 NAT9Q9BTE0 207 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 DENND2DQ9H6A0 471 aaPredicted RBP12.5□□□□□ -0.41
LRP1-207ENST00000554174 KCNK4Q9NYG8 393 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 NEU3Q9UQ49 428 aa12.5□□□□□ -0.41
LRP1-207ENST00000554174 HBS1LQ9Y450 684 aaKnown RBP12.5□□□□□ -0.41
LRP1-207ENST00000554174 COL4A4P53420 1690 aaPredicted RBP12.49□□□□□ -0.41
LRP1-207ENST00000554174 ATP9BO43861 1147 aa12.49□□□□□ -0.41
LRP1-207ENST00000554174 PLIN3O60664 434 aa12.49□□□□□ -0.41
LRP1-207ENST00000554174 ENTPD5O75356 428 aa12.49□□□□□ -0.41
LRP1-207ENST00000554174 SRGAP2BP0DMP2 458 aa12.49□□□□□ -0.41
LRP1-207ENST00000554174 FGF3P11487 239 aaPredicted RBP12.49□□□□□ -0.41
LRP1-207ENST00000554174 ARRB2P32121 409 aa12.49□□□□□ -0.41
LRP1-207ENST00000554174 AQP5P55064 265 aa12.49□□□□□ -0.41
LRP1-207ENST00000554174 STX3Q13277 289 aa12.49□□□□□ -0.41
LRP1-207ENST00000554174 KYAT3Q6YP21 454 aaKnown RBP12.49□□□□□ -0.41
LRP1-207ENST00000554174 PDZD4Q76G19 769 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms