RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 MYO16Q9Y6X6 1858 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 TARSL2A2RTX5 802 aaKnown RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ARHGAP42A6NI28 874 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 H0Y626 953 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 NDC80O14777 642 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 MTSS1O43312 755 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 TSPAN3O60637 253 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 PECAM1P16284 738 aaPredicted RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 GBP2P32456 591 aaPredicted RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ETFBP38117 255 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 KCNJ1P48048 391 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 NDST2P52849 883 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 OXCT1P55809 520 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 YBEYP58557 167 aaPredicted RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 GBE1Q04446 702 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ADGRE1Q14246 886 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ERCC6LQ2NKX8 1250 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 C5orf22Q49AR2 442 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 FAM133BQ5BKY9 247 aaKnown RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 MPP7Q5T2T1 576 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 C6orf118Q5T5N4 469 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 HEATR6Q6AI08 1181 aaKnown RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 GPR153Q6NV75 609 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 RFWD3Q6PCD5 774 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 Q6ZNB5 142 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 CHST9Q7L1S5 443 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF354CQ86Y25 554 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 NPAS3Q8IXF0 933 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 IFT20Q8IY31 132 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF683Q8IZ20 524 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ZDHHC14Q8IZN3 488 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF557Q8N988 423 aaPredicted RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 TDRD5Q8NAT2 981 aaKnown RBP10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 SLC35B2Q8TB61 432 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ADAMTS19Q8TE59 1207 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 DDI1Q8WTU0 396 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 NSMCE1Q8WV22 266 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 RUBCNQ92622 972 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 SLCO2A1Q92959 643 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 IGSF8Q969P0 613 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ZSWIM3Q96MP5 696 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 FAM118BQ9BPY3 351 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 S1PR5Q9H228 398 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ZFP14Q9HCL3 533 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 ETNK2Q9NVF9 386 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 DTLQ9NZJ0 730 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 CD207Q9UJ71 328 aa10.75□□□□□ -0.69
TMEM55B-205ENST00000554028 GREB1Q4ZG55 1949 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 A0A1B0GVM2 712 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 BCLAF3A2AJT9 711 aaKnown RBP10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 TCAF2A6NFQ2 919 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 DFFAO00273 331 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 TRDMT1O14717 391 aaKnown RBP10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 TTI1O43156 1089 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 RAD51CO43502 376 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 MFSD11O43934 449 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 RAMP2O60895 175 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 TBL1XO60907 577 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 NEBLO76041 1014 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 HEXIM1O94992 359 aaKnown RBP10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 IFNB1P01574 187 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 SLC6A4P31645 630 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 IFNAR2P48551 515 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF33AQ06730 810 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 AP1B1Q10567 949 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 POLD3Q15054 466 aaPredicted RBP10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 PARP15Q460N3 678 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 SLC45A4Q5BKX6 768 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 TIGD7Q6NT04 549 aaPredicted RBP10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 TTC27Q6P3X3 843 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 C4orf22Q6V702 233 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 TFAP2DQ7Z6R9 452 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 SETD3Q86TU7 594 aaPredicted RBP10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 JAMLQ86YT9 394 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 BBS7Q8IWZ6 715 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 YAF2Q8IY57 180 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 CFAP52Q8N1V2 620 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 UMODL1-AS1Q8N2C9 162 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 ATPAF2Q8N5M1 289 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 LRRN4CLQ8ND94 238 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 BPIFB1Q8TDL5 484 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 WBP2Q969T9 261 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 LRRC45Q96CN5 670 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 ASB16Q96NS5 453 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 TMEM121Q9BTD3 319 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 HAUS2Q9NVX0 235 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 OBP2AQ9NY56 170 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 ASIC3Q9UHC3 531 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 HPCAL4Q9UM19 191 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 CCL26Q9Y258 94 aa10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 V9GYY5 206 aaPredicted RBP10.74□□□□□ -0.69
TMEM55B-205ENST00000554028 UQCRHLA0A096LP55 91 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 SOX1O00570 391 aaPredicted RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 KCNN4O15554 427 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 CTIFO43310 598 aaKnown RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 GREM1O60565 184 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 TBX10O75333 385 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms