RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CSTF1Q05048 431 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 TRDNQ13061 729 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CCDC6Q16204 474 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CSRP2Q16527 193 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 SLC44A4Q53GD3 710 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 COLEC12Q5KU26 742 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 TWF2Q6IBS0 349 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 TANGO2Q6ICL3 276 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 TIGD7Q6NT04 549 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 DCLRE1AQ6PJP8 1040 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 C15orf39Q6ZRI6 1047 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 LILRB2Q8N423 598 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 LILRA3Q8N6C8 439 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 LNX1Q8TBB1 728 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 KCNG4Q8TDN1 519 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 HASPINQ8TF76 798 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 ING5Q8WYH8 240 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 SMG7Q92540 1137 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 RUBCNQ92622 972 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CLDN23Q96B33 292 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CCDC136Q96JN2 1154 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 NLRP4Q96MN2 994 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 LRRC3BQ96PB8 259 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 KXD1Q9BQD3 176 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 LZTS2Q9BRK4 669 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 NDC1Q9BTX1 674 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 LSM14BQ9BX40 385 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 SLC46A2Q9BY10 475 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 RHOBTB2Q9BYZ6 727 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 EPC1Q9H2F5 836 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 POFUT1Q9H488 388 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 NXF3Q9H4D5 531 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 SERHL2Q9H4I8 314 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 DHX33Q9H6R0 707 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 RSAD1Q9HA92 442 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CYP4F11Q9HBI6 524 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 POLD4Q9HCU8 107 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 PRMT8Q9NR22 394 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 HEBP1Q9NRV9 189 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 AGPAT5Q9NUQ2 364 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 RGL1Q9NZL6 768 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 IGSF9Q9P2J2 1179 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 SUCLA2Q9P2R7 463 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 SEC63Q9UGP8 760 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 PIN4Q9Y237 131 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 IPPQ9Y573 584 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 RIF1Q5UIP0 2472 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 TICRRQ7Z2Z1 1910 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 NID2Q14112 1375 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 ZFHX2Q9C0A1 2572 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 KIF26AQ9ULI4 1882 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CYP3A7-CYP3A51PA0A087WV96 503 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 KLF18A0A0U1RQI7 1052 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 ESYT2A0FGR8 921 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 ARL5CA6NH57 179 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CASTOR2A6NHX0 329 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 TMEM200CA6NKL6 621 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 GOLGA8AA7E2F4 631 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 I3L4J1 428 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 K7ESF4 209 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 MAGEB2O15479 319 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 PRPF3O43395 683 aaKnown RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 DNAJC6O75061 913 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 DNAJC8O75937 253 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 ALDH1A2O94788 518 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 SEC24AO95486 1093 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 FOSP01100 380 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 ALDH2P05091 517 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CALM1P0DP23 149 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CALM2P0DP24 149 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CALM3P0DP25 149 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 ZNF37AP17032 561 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 GJA1P17302 382 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CEBPBP17676 345 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 ARF4P18085 180 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CYP3A7P24462 503 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CASRP41180 1078 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 OR1G1P47890 313 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 GNAQP50148 359 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CCT2P78371 535 aaKnown RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 SATB1Q01826 763 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 MBTD1Q05BQ5 628 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CD69Q07108 199 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 MTAPQ13126 283 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CAPSQ13938 189 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CTTNQ14247 550 aaKnown RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 MLF2Q15773 248 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 Q4G0T1 1027 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 FNDC3BQ53EP0 1204 aaKnown RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 N4BP2L1Q5TBK1 243 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 PIK3R6Q5UE93 754 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 FUT10Q6P4F1 479 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CASC1Q6TDU7 716 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 Q6ZS52 159 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CATSPER4Q7RTX7 472 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 SMAP1Q8IYB5 467 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 UNC5BQ8IZJ1 945 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 GLB1L3Q8NCI6 653 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 OR5M3Q8NGP4 307 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 TBCKQ8TEA7 893 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms