RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 RRN3P2A6NIE6 340 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 GOLGA8TH3BQL2 631 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 TREHO43280 583 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 PROCP04070 461 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 ERCC2P18074 760 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 PEX19P40855 299 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 TUBB3Q13509 450 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 DLG2Q15700 870 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 SV2CQ496J9 727 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 KIAA0319Q5VV43 1072 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 KBTBD2Q8IY47 623 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 PLD6Q8N2A8 252 aaKnown RBP14.93□□□□□ -0.02
ACTN1-211ENST00000553882 DCLK2Q8N568 766 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 KCNK16Q96T55 309 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 SORT1Q99523 831 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 HNRNPABQ99729 332 aaKnown RBP14.93□□□□□ -0.02
ACTN1-211ENST00000553882 ACSS2Q9NR19 701 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 EIF2B3Q9NR50 452 aaKnown RBP14.93□□□□□ -0.02
ACTN1-211ENST00000553882 UBP1Q9NZI7 540 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 IPPQ9Y573 584 aa14.93□□□□□ -0.02
ACTN1-211ENST00000553882 NRCAMQ92823 1304 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 ARHGAP42A6NI28 874 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 YJEFN3A6XGL0 299 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 MEIS3P2A8K0S8 358 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 STRNO43815 780 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 ATP9BO43861 1147 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 SIN3BO75182 1162 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 CIB2O75838 187 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 SERPINE1P05121 402 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 HOXD8P13378 290 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-211ENST00000553882 PTPN1P18031 435 aaKnown RBP14.92□□□□□ -0.02
ACTN1-211ENST00000553882 PNPLA4P41247 253 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 KLC1Q07866 573 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 PEX6Q13608 980 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 DPYSQ14117 519 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 STRA8Q7Z7C7 330 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 NPWQ8N729 165 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 NPLOC4Q8TAT6 608 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 PPP4R1Q8TF05 950 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 WNT8BQ93098 351 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 MOCOSQ96EN8 888 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 MFSD3Q96ES6 412 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 GORASP1Q9BQQ3 440 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 ULBP1Q9BZM6 244 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 SNX10Q9Y5X0 201 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 CCL15-CCL14A0A0B4J2E2 113 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 LIN7AO14910 233 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-211ENST00000553882 USP1O94782 785 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 BAG2O95816 211 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 PTPN3P26045 913 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 EPHX2P34913 555 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 GP5P40197 560 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 PGGT1BP53609 377 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 USP4Q13107 963 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 PPP2R5DQ14738 602 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 CCL15Q16663 113 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 DNAL1Q4LDG9 190 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 HSP90AA5PQ58FG0 334 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 RALGPS1Q5JS13 557 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 UBXN11Q5T124 520 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 TWF2Q6IBS0 349 aaKnown RBP14.92□□□□□ -0.02
ACTN1-211ENST00000553882 GSTCDQ8NEC7 633 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 NT5C3BQ969T7 300 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 CYP4F11Q9HBI6 524 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 MAN1C1Q9NR34 630 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 VANGL2Q9ULK5 521 aa14.92□□□□□ -0.02
ACTN1-211ENST00000553882 LOC100653049A0A140TA62 436 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 DCLK1O15075 740 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 KRT34O76011 436 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 SORBS2O94875 1100 aaKnown RBP14.91□□□□□ -0.02
ACTN1-211ENST00000553882 FYNP06241 537 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 LINGO3P0C6S8 592 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 RALBP11234 206 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 AOC1P19801 751 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 NCF2P19878 526 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-211ENST00000553882 GCKP35557 465 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 IRF9Q00978 393 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 RABGAP1LQ5R372 815 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 TMEM154Q6P9G4 183 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 GPRIN1Q7Z2K8 1008 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 CCNJLQ8IV13 435 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 PPFIBP2Q8ND30 876 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 CCDC124Q96CT7 223 aaKnown RBP14.91□□□□□ -0.02
ACTN1-211ENST00000553882 SYT15Q9BQS2 421 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 NAT9Q9BTE0 207 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 YIPF3Q9GZM5 350 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 SOX13Q9UN79 622 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 SHROOM3Q8TF72 1996 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 SMIM35A0A1B0GVV1 85 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 A6NHS1 94 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 ZBTB24O43167 697 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-211ENST00000553882 XPOTO43592 962 aaKnown RBP14.91□□□□□ -0.02
ACTN1-211ENST00000553882 F2P00734 622 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 NCAM1P13591 858 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 TPH1P17752 444 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 ADRA1BP35368 520 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 CPOXP36551 454 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 IDH3AP50213 366 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 EPHB1P54762 984 aa14.91□□□□□ -0.02
ACTN1-211ENST00000553882 TPI1P60174 286 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms