RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 NAALADL1Q9UQQ1 740 aa14.98□□□□□ -0.01
SHMT2-208ENST00000553868 ASB3Q9Y575 518 aa14.98□□□□□ -0.01
SHMT2-208ENST00000553868 UNC79Q9P2D8 2635 aa14.98□□□□□ -0.01
SHMT2-208ENST00000553868 SPAARA0A1B0GVQ0 90 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 LRRD1A4D1F6 860 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 EFCAB8A8MWE9 144 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 CDX4O14627 284 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-208ENST00000553868 SOAT2O75908 522 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 SEC24AO95486 1093 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 FGGP02679 453 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 POU2F2P09086 479 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 PYGMP11217 842 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 ATF6P18850 670 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 CCR2P41597 374 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 PPP3CCP48454 512 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 HDAC4P56524 1084 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 ZNF211Q13398 564 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-208ENST00000553868 PDK2Q15119 407 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 PRSS36Q5K4E3 855 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 SYPL2Q5VXT5 272 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 CCDC70Q6NSX1 233 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 RSRC2Q7L4I2 434 aaKnown RBP14.97□□□□□ -0.01
SHMT2-208ENST00000553868 ARFGAP1Q8N6T3 406 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 MYRIPQ8NFW9 859 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 GIPC2Q8TF65 315 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 LRIG1Q96JA1 1093 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 MS4A14Q96JA4 679 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 ZC3H10Q96K80 434 aaKnown RBP14.97□□□□□ -0.01
SHMT2-208ENST00000553868 DUSP15Q9H1R2 295 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-208ENST00000553868 CACNA2D2Q9NY47 1150 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 GMIPQ9P107 970 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 INSL5Q9Y5Q6 135 aa14.97□□□□□ -0.01
SHMT2-208ENST00000553868 PCNX2A6NKB5 2137 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 A0A1W2PQH9 124 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 PATE3B3GLJ2 98 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 CCDC188H7C350 402 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 KRIT1O00522 736 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 MDM4O15151 490 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 FYNP06241 537 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 PTPN7P35236 360 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 KPNA1P52294 538 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-208ENST00000553868 TAF10Q12962 218 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 PON2Q15165 354 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 ARL13BQ3SXY8 428 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 ERMARDQ5T6L9 678 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 MSANTD2Q6P1R3 559 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 SCD5Q86SK9 330 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 VSIG1Q86XK7 387 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 SLC13A5Q86YT5 568 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-208ENST00000553868 ELMOD1Q8N336 334 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 KCTD6Q8NC69 237 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 SPATA4Q8NEY3 305 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 HSPH1Q92598 858 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 EDEM1Q92611 657 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 TRMT2BQ96GJ1 504 aaKnown RBP14.96□□□□□ -0.01
SHMT2-208ENST00000553868 MYRFLQ96LU7 910 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 CORO1BQ9BR76 489 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 TMEM9BQ9NQ34 198 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 DDIT4Q9NX09 232 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 EFR3BQ9Y2G0 817 aa14.96□□□□□ -0.01
SHMT2-208ENST00000553868 NUP205Q92621 2012 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 PDE2AO00408 941 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-208ENST00000553868 TJP3O95049 919 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 LRG1P02750 347 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 RARAP10276 462 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 TCF4P15884 667 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 GJA1P17302 382 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 IL1R2P27930 398 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 USP46P62068 366 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 SCAPQ12770 1279 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 TWF1Q12792 350 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 NME3Q13232 169 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 KRT81Q14533 505 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 SMTNL2Q2TAL5 461 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 TFDP3Q5H9I0 405 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 SPOCD1Q6ZMY3 1216 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 BNIPLQ7Z465 357 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 CHCHD4Q8N4Q1 142 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 ZNF276Q8N554 614 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 STKLD1Q8NE28 680 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 DQX1Q8TE96 717 aaKnown RBP14.95□□□□□ -0.02
SHMT2-208ENST00000553868 UBXN4Q92575 508 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 NTAN1Q96AB6 310 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 RNF25Q96BH1 459 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-208ENST00000553868 RSPRY1Q96DX4 576 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 ZNF512Q96ME7 567 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-208ENST00000553868 SERPINB11Q96P15 392 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 OSBPL8Q9BZF1 889 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 HOMER3Q9NSC5 361 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHMT2-208ENST00000553868 TRPM5Q9NZQ8 1165 aa14.95□□□□□ -0.02
SHMT2-208ENST00000553868 MAGED2Q9UNF1 606 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-208ENST00000553868 BCLAF3A2AJT9 711 aaKnown RBP14.94□□□□□ -0.02
SHMT2-208ENST00000553868 ZNF487B1APH4 448 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 TADA3O75528 432 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 SLC2A3P11169 496 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 RARGP13631 454 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 PTPN2P17706 415 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 TFE3P19532 575 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-208ENST00000553868 KDELR1P24390 212 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms