RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 KIAA1522Q9P206 1035 aaPredicted RBP23.51■■□□□ 1.35
TDP1-206ENST00000553569 PCDHGA2Q9Y5H1 932 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 STON1Q9Y6Q2 735 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.5■■□□□ 1.35
TDP1-206ENST00000553569 TCRBV21S2A2A0A5A6 115 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 WASH3PC4AMC7 463 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 TIMM44O43615 452 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 CLDN11O75508 207 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 CYP1A2P05177 515 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 CDH4P55283 916 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 ZNF177Q13360 481 aaPredicted RBP23.5■■□□□ 1.35
TDP1-206ENST00000553569 FNDC3BQ53EP0 1204 aaKnown RBP23.5■■□□□ 1.35
TDP1-206ENST00000553569 CXorf57Q6NSI4 855 aaKnown RBP23.5■■□□□ 1.35
TDP1-206ENST00000553569 TFAP2DQ7Z6R9 452 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 SLFN11Q7Z7L1 901 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 LONP2Q86WA8 852 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 FNIP1Q8TF40 1166 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 MAGEB5Q9BZ81 275 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 POLMQ9NP87 494 aaPredicted RBP23.5■■□□□ 1.35
TDP1-206ENST00000553569 OR12D3Q9UGF7 316 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 INTS6Q9UL03 887 aaKnown RBP23.5■■□□□ 1.35
TDP1-206ENST00000553569 DOCK4Q8N1I0 1966 aa23.5■■□□□ 1.35
TDP1-206ENST00000553569 MOCS3O95396 460 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 ATP5BP06576 529 aaKnown RBP23.49■■□□□ 1.35
TDP1-206ENST00000553569 MZF1P28698 734 aaPredicted RBP23.49■■□□□ 1.35
TDP1-206ENST00000553569 HOXA6P31267 233 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 NBL1P41271 181 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 EFHC2Q5JST6 749 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 SERPINA13PQ6UXR4 307 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 WDR5BQ86VZ2 330 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 APCDD1Q8J025 514 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 ZBTB44Q8NCP5 570 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 HMGB4Q8WW32 186 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 FAM122AQ96E09 287 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 BTBD6Q96KE9 485 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 GABRG3Q99928 467 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 BCCIPQ9P287 314 aaKnown RBP eCLIP23.49■■□□□ 1.35
TDP1-206ENST00000553569 ANAPC7Q9UJX3 599 aa23.49■■□□□ 1.35
TDP1-206ENST00000553569 IGLV3-10A0A075B6K4 115 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 DRGXA6NNA5 263 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 FAM72CH0Y354 149 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 NPC1O15118 1278 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 AXIN1O15169 862 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 RNF8O76064 485 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 ALDH1A2O94788 518 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 DLDP09622 509 aaKnown RBP23.48■■□□□ 1.35
TDP1-206ENST00000553569 PRKCHP24723 683 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 SCAPQ12770 1279 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 E2F5Q15329 346 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 PLEKHG6Q3KR16 790 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 FAM72AQ5TYM5 149 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 FAM72DQ6L9T8 149 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 KIAA1211LQ6NV74 962 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 RWDD4Q6NW29 188 aaKnown RBP23.48■■□□□ 1.35
TDP1-206ENST00000553569 FAM72BQ86X60 149 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 PYROXD2Q8N2H3 581 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 MDGA1Q8NFP4 955 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 OR52K2Q8NGK3 314 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 CTNNBL1Q8WYA6 563 aaPredicted RBP23.48■■□□□ 1.35
TDP1-206ENST00000553569 TPSD1Q9BZJ3 242 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 ZYG11BQ9C0D3 744 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 OSBPL2Q9H1P3 480 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 GPATCH2LQ9NWQ4 482 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 PCSK1NQ9UHG2 260 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 FZD10Q9ULW2 581 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 PLA2G4CQ9UP65 541 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 EML5Q05BV3 1969 aa23.48■■□□□ 1.35
TDP1-206ENST00000553569 A0A1W2PQF6 199 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 RHOCP08134 193 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 H2AFZP0C0S5 128 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 HLA-EP13747 358 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 CTSOP43234 321 aaPredicted RBP23.47■■□□□ 1.35
TDP1-206ENST00000553569 OXCT1P55809 520 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 SRSF5Q13243 272 aaKnown RBP23.47■■□□□ 1.35
TDP1-206ENST00000553569 STARD3Q14849 445 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 ARTNQ5T4W7 220 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 MANEALQ5VSG8 457 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 DAB2IPQ5VWQ8 1189 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 H2AFVQ71UI9 128 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 PGBD3Q8N328 593 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 ARFGAP1Q8N6T3 406 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 ZNF366Q8N895 744 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 TTC17Q96AE7 1141 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 TBC1D31Q96DN5 1066 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 PEBP4Q96S96 227 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 CTTNBP2NLQ9P2B4 639 aa23.47■■□□□ 1.35
TDP1-206ENST00000553569 LILRB5O75023 590 aa23.46■■□□□ 1.35
TDP1-206ENST00000553569 LRIG2O94898 1065 aa23.46■■□□□ 1.35
TDP1-206ENST00000553569 ASLP04424 464 aa23.46■■□□□ 1.35
TDP1-206ENST00000553569 PLA2G5P39877 138 aa23.46■■□□□ 1.35
TDP1-206ENST00000553569 NRG1Q02297 640 aaPredicted RBP23.46■■□□□ 1.35
TDP1-206ENST00000553569 SLC12A1Q13621 1099 aa23.46■■□□□ 1.35
TDP1-206ENST00000553569 PTPRNQ16849 979 aa23.46■■□□□ 1.35
TDP1-206ENST00000553569 RNF219Q5W0B1 726 aaPredicted RBP23.46■■□□□ 1.35
TDP1-206ENST00000553569 ZNF564Q8TBZ8 553 aaPredicted RBP23.46■■□□□ 1.35
TDP1-206ENST00000553569 MUC3BQ9H195 1237 aa23.46■■□□□ 1.35
TDP1-206ENST00000553569 PPARGC1AQ9UBK2 798 aaKnown RBP23.46■■□□□ 1.35
TDP1-206ENST00000553569 CKAP5Q14008 2032 aa23.45■■□□□ 1.35
TDP1-206ENST00000553569 CREB3O43889 395 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 PRPSAP2O60256 369 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms