RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ELP4Q96EB1 424 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 THAP7Q9BT49 309 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-209ENST00000553280 LMAN2LQ9H0V9 348 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 CCDC68Q9H2F9 335 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 MROH8Q9H579 483 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 MMRN2Q9H8L6 949 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 USP29Q9HBJ7 922 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 SMYD2Q9NRG4 433 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 DUSP22Q9NRW4 184 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 ALKBH4Q9NXW9 302 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 HCN3Q9P1Z3 774 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 SEMA5BQ9P283 1151 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 ANKFY1Q9P2R3 1169 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 KLQ9UEF7 1012 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 FZD4Q9ULV1 537 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 KDM3AQ9Y4C1 1321 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 TEX22C9J3V5 150 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 TCERG1O14776 1098 aaKnown RBP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 LYL1P12980 280 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 ALOX12P18054 663 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 SFPQP23246 707 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 PRPH2P23942 346 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 AVPR2P30518 371 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 HOXD13P35453 343 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 AGTR2P50052 363 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 RPS6KA3P51812 740 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 BLOC1S1P78537 153 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 CFHR3Q02985 330 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 MPP3Q13368 585 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 MAMLD1Q13495 774 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 TDGQ13569 410 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 ALKBH1Q13686 389 aaKnown RBP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 TBCEQ15813 527 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 TMEM63BQ5T3F8 832 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 FNDC7Q5VTL7 733 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 KAZNQ674X7 775 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 ZNF280DQ6N043 979 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 ANKRD16Q6P6B7 361 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 SLC22A25Q6T423 547 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 SLC39A5Q6ZMH5 540 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 ADSSL1Q8N142 457 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 ENDOVQ8N8Q3 282 aaKnown RBP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 RFWD2Q8NHY2 731 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 KCNG4Q8TDN1 519 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 NEU4Q8WWR8 484 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 RUFY2Q8WXA3 655 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 HAS1Q92839 578 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 KAZALD1Q96I82 304 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 CLSTN3Q9BQT9 956 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 HTATIP2Q9BUP3 242 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 FSD1LQ9BXM9 530 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 RNF26Q9BY78 433 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 CTDSP1Q9GZU7 261 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 SLC2A4RGQ9NR83 387 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 ZDHHC7Q9NXF8 308 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 GAR1Q9NY12 217 aaKnown RBP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 REXO2Q9Y3B8 237 aaKnown RBP5.51□□□□□ -1.53
SCFD1-209ENST00000553280 PSAT1Q9Y617 370 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 PIAS3Q9Y6X2 628 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 RUSC2Q8N2Y8 1516 aa5.51□□□□□ -1.53
SCFD1-209ENST00000553280 NPIPB13A6NJU9 1138 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 NPIPB5A8MRT5 1133 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 TTC34A8MYJ7 566 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 NPIPB4C9JG80 1138 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 ACADMP11310 421 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 LAMP2P13473 410 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 MAPK4P31152 587 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 ARHGAP8P85298 464 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 NAA25Q14CX7 972 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 GALNT5Q7Z7M9 940 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 TMTC2Q8N394 836 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 LINC01465Q8N7H1 131 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 TNIP2Q8NFZ5 429 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 METTL6Q8TCB7 284 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 TFAP2BQ92481 460 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 KCNJ9Q92806 393 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 NR1H4Q96RI1 486 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-209ENST00000553280 WDR11Q9BZH6 1224 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 SLC25A18Q9H1K4 315 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 SFXN1Q9H9B4 322 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 DIAPH3Q9NSV4 1193 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 KCND2Q9NZV8 630 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 ADAMTS5Q9UNA0 930 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 OSGIN2Q9Y236 505 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 B3GNT3Q9Y2A9 372 aa5.5□□□□□ -1.53
SCFD1-209ENST00000553280 SPATA31A1Q5TZJ5 1347 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 TMEM232C9JQI7 657 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 URI1O94763 535 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-209ENST00000553280 SGPL1O95470 568 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 URODP06132 367 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 NPSP0C0P6 89 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 ENGP17813 658 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 SLC8A1P32418 973 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 PTGS2P35354 604 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 HNF1BP35680 557 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 ARL1P40616 181 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-209ENST00000553280 EEFSECP57772 596 aaKnown RBP5.49□□□□□ -1.53
SCFD1-209ENST00000553280 TGFB2P61812 414 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 GAB1Q13480 694 aa5.49□□□□□ -1.53
SCFD1-209ENST00000553280 ERCC6LQ2NKX8 1250 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms