RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 NEU2Q9Y3R4 380 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ZNF840PA6NDX5 716 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 GDI1P31150 447 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ITIH3Q06033 890 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 TUBB2AQ13885 445 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 RAB30Q15771 203 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 RABGAP1LQ5R372 815 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ATXN7L2Q5T6C5 722 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ALS2CLQ60I27 953 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 CD300LGQ6UXG3 332 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 CDKL3Q8IVW4 592 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ARFGAP1Q8N6T3 406 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 PPP1R14CQ8TAE6 165 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 FUBP3Q96I24 572 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 TUBB2BQ9BVA1 445 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 BPIFA1Q9NP55 256 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 SCN10AQ9Y5Y9 1956 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 UBA6A0AVT1 1052 aaPredicted RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 FOXO6A8MYZ6 492 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 IRAK2O43187 625 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 TACR2P21452 398 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 RPL21P46778 160 aaKnown RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 PDE1BQ01064 536 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 SLMAPQ14BN4 828 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 XKR4Q5GH76 650 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 MARC1Q5VT66 337 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 NUGGCQ68CJ6 796 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 TAS2R42Q7RTR8 314 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 HDXQ7Z353 690 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 CHPFQ8IZ52 775 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 PLD5Q8N7P1 536 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 FICDQ9BVA6 458 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 ABCB8Q9NUT2 735 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 LIMD1Q9UGP4 676 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 HS3ST4Q9Y661 456 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 LCA5LO95447 670 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 GLDCP23378 1020 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 SARNPP82979 210 aaKnown RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 LMNB2Q03252 620 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 GAD2Q05329 585 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 PTP4A2Q12974 167 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 PDK2Q15119 407 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 NOMO1Q15155 1222 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 LONRF1Q17RB8 773 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 LY6G5CQ5SRR4 150 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 FAM171BQ6P995 826 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 WBP2Q969T9 261 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 ALKBH8Q96BT7 664 aaKnown RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 ERP44Q9BS26 406 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 DUS2Q9NX74 493 aaKnown RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 GTSE1Q9NYZ3 720 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 LCMT1Q9UIC8 334 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 DOCK6Q96HP0 2047 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 RP1L1Q8IWN7 2480 aaPredicted RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 CNTRLQ7Z7A1 2325 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 J3KR12 359 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 MX2P20592 715 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 FSHRP23945 695 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 CD86P42081 329 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 CDKN2BP42772 138 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 SOX9P48436 509 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 PAPOLAP51003 745 aaKnown RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 GRIN2CQ14957 1233 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 BRD3Q15059 726 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 EML3Q32P44 896 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 BZW1Q7L1Q6 419 aaKnown RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 KATNAL2Q8IYT4 538 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 LPCAT1Q8NF37 534 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 HTR3CQ8WXA8 447 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 IGSF8Q969P0 613 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 HMCESQ96FZ2 354 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 ZDHHC6Q9H6R6 413 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 RNF14Q9UBS8 474 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 TMEM59LQ9UK28 342 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 C3orf70A6NLC5 250 aaPredicted RBP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 HLA-EP13747 358 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 FOSL2P15408 326 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 PMLP29590 882 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 CDC25CP30307 473 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 L1CAMP32004 1257 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 GALNT3Q14435 633 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 RAPH1Q70E73 1250 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 GAREM2Q75VX8 874 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 SH2D3CQ8N5H7 860 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 SLC46A2Q9BY10 475 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 ZYG11BQ9C0D3 744 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 TDP1Q9NUW8 608 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHPT1-208ENST00000552215 FBXW11Q9UKB1 542 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 SLC8A2Q9UPR5 921 aa8.38□□□□□ -1.07
CHPT1-208ENST00000552215 NUP205Q92621 2012 aa8.37□□□□□ -1.07
CHPT1-208ENST00000552215 EXOC1LA0A1B0GW35 172 aa8.37□□□□□ -1.07
CHPT1-208ENST00000552215 ACSL4O60488 711 aa8.37□□□□□ -1.07
CHPT1-208ENST00000552215 NFKB1P19838 968 aa8.37□□□□□ -1.07
CHPT1-208ENST00000552215 GRIA1P42261 906 aa8.37□□□□□ -1.07
CHPT1-208ENST00000552215 AMPD2Q01433 879 aa8.37□□□□□ -1.07
CHPT1-208ENST00000552215 HIF1AQ16665 826 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms