RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 SMYD4Q8IYR2 804 aaPredicted RBP22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 CFAP52Q8N1V2 620 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 CARNMT1Q8N4J0 409 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 HJURPQ8NCD3 748 aaPredicted RBP22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 FCRL2Q96LA5 508 aaPredicted RBP22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 NRSN2Q9GZP1 204 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 GDF3Q9NR23 364 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 RNF225M0QZC1 329 aaPredicted RBP22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 TLR4O00206 839 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 NXPH1P58417 271 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 SFSWAPQ12872 951 aaKnown RBP22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 LRRC69Q6ZNQ3 347 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 KANSL1Q7Z3B3 1105 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 SPATS2Q86XZ4 545 aaKnown RBP22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 APCDD1Q8J025 514 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 ZNF557Q8N988 423 aaPredicted RBP22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 IRGQQ8WZA9 623 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 PTPRN2Q92932 1015 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 SERAC1Q96JX3 654 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 NUCKS1Q9H1E3 243 aaKnown RBP22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 KIAA1257Q9ULG3 409 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 MYLKQ15746 1914 aa22.43■■□□□ 1.18
SMARCD1-212ENST00000551966 ITIH6Q6UXX5 1313 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 CETN3O15182 167 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 LTFP02788 710 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 SRPRAP08240 638 aaKnown RBP22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 EPB41P11171 864 aaKnown RBP22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 GOT1P17174 413 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 RXRGP48443 463 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 LRMPQ12912 555 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 DCAF6Q58WW2 860 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 MS4A13Q5J8X5 152 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 SFMBT2Q5VUG0 894 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 KRBA2Q6ZNG9 492 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 SND1Q7KZF4 910 aaKnown RBP eCLIP22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 STK40Q8N2I9 435 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 OR14C36Q8NHC7 312 aa22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 RPL10LQ96L21 214 aaKnown RBP22.42■■□□□ 1.18
SMARCD1-212ENST00000551966 EDDM13A0A1B0GTR0 161 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 YKT6O15498 198 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 CALCAP01258 141 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 PSMD8P48556 350 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 ARRB1P49407 418 aaPredicted RBP22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 ADPRHP54922 357 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 PPP2CBP62714 309 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 PPP2CAP67775 309 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 TCERG1LQ5VWI1 586 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 SLC39A13Q96H72 371 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 ERVMER34-1Q9H9K5 563 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 ARHGAP20Q9P2F6 1191 aa22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 XPO7Q9UIA9 1087 aaKnown RBP22.41■■□□□ 1.18
SMARCD1-212ENST00000551966 LATO43561 262 aa22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 C5AR1P21730 350 aa22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 METAP1P53582 386 aa22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 YWHAEP62258 255 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 ECT2LQ008S8 904 aa22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 CNGA2Q16280 664 aa22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 DCAF17Q5H9S7 520 aaPredicted RBP22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 SNIP1Q8TAD8 396 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 DQX1Q8TE96 717 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 SPATA32Q96LK8 384 aa22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 FCRL3Q96P31 734 aaPredicted RBP22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 DDX50Q9BQ39 737 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 NAALADL1Q9UQQ1 740 aa22.4■■□□□ 1.18
SMARCD1-212ENST00000551966 SETXQ7Z333 2677 aaKnown RBP22.39■■□□□ 1.18
SMARCD1-212ENST00000551966 TBC1D3DA0A087WVF3 549 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3IA0A087WXS9 549 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3EA0A087X179 549 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3KA0A087X1G2 549 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3FA6NER0 549 aaPredicted RBP22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3LB9A6J9 549 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 RRP8O43159 456 aaKnown RBP22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 LUC7L3O95232 432 aaKnown RBP22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 PAEPP09466 180 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3HP0C7X1 549 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 CKMT2P17540 419 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 DRD3P35462 400 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 CDH18Q13634 790 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3GQ6DHY5 549 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3CQ6IPX1 549 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TMEM270Q6UE05 265 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TBC1D3Q8IZP1 549 aaPredicted RBP22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 MFSD2AQ8NA29 543 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 FGF11Q92914 225 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 COL26A1Q96A83 441 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 MIS12Q9H081 205 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 GOLPH3LQ9H4A5 285 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 TLR6Q9Y2C9 796 aa22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 HELZ2Q9BYK8 2649 aaKnown RBP22.39■■□□□ 1.17
SMARCD1-212ENST00000551966 BRINP1O60477 761 aa22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 VAV1P15498 845 aa22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 PRCPP42785 496 aa22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 NUMBP49757 651 aa22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 STK19P49842 368 aaPredicted RBP22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 ILKQ13418 452 aa22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 PCSK4Q6UW60 755 aa22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 CACTIN-AS1Q8N1I8 211 aa22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 LSM14AQ8ND56 463 aaKnown RBP22.38■■□□□ 1.17
SMARCD1-212ENST00000551966 RFFLQ8WZ73 363 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms