RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 ZNF542PQ5EBM4 170 aa15□□□□□ -0.01
VPS29-209ENST00000551655 RRAGBQ5VZM2 374 aa15□□□□□ -0.01
VPS29-209ENST00000551655 CLEC18BQ6UXF7 455 aa15□□□□□ -0.01
VPS29-209ENST00000551655 CLEC14AQ86T13 490 aa15□□□□□ -0.01
VPS29-209ENST00000551655 PRPF39Q86UA1 669 aaKnown RBP15□□□□□ -0.01
VPS29-209ENST00000551655 CLEC18CQ8NCF0 446 aa15□□□□□ -0.01
VPS29-209ENST00000551655 PLD4Q96BZ4 506 aa15□□□□□ -0.01
VPS29-209ENST00000551655 SFMBT1Q9UHJ3 866 aa15□□□□□ -0.01
VPS29-209ENST00000551655 PCDHGA8Q9Y5G5 932 aa15□□□□□ -0.01
VPS29-209ENST00000551655 CPED1A4D0V7 1026 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 LZTS3O60299 673 aaPredicted RBP14.99□□□□□ -0.01
VPS29-209ENST00000551655 NOBOXO60393 691 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 TBL1XO60907 577 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 THEGLP0DJG4 465 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 VAV1P15498 845 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 DUSP3P51452 185 aaPredicted RBP14.99□□□□□ -0.01
VPS29-209ENST00000551655 ST8SIA6P61647 398 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 YWHAGP61981 247 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS29-209ENST00000551655 STAT4Q14765 748 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 CLCA4Q14CN2 919 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 GUSBP11Q6P575 273 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 MMS22LQ6ZRQ5 1243 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 IQCHQ86VS3 1027 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 KLHDC7BQ96G42 594 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 LMLNQ96KR4 655 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 CDK5RAP1Q96SZ6 601 aaKnown RBP14.99□□□□□ -0.01
VPS29-209ENST00000551655 PANK2Q9BZ23 570 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 PNPLA8Q9NP80 782 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 STIM2Q9P246 746 aa14.99□□□□□ -0.01
VPS29-209ENST00000551655 A0A087X0B3 334 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 K7ESM1 405 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 MSI1O43347 362 aaKnown RBP14.98□□□□□ -0.01
VPS29-209ENST00000551655 GJB6O95452 261 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 IL1BP01584 269 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 PRLRP16471 622 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 ASPAP45381 313 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 KCNMA1Q12791 1236 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 SERINC3Q13530 473 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 TBR1Q16650 682 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 NELFCDQ8IXH7 590 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 ARL14Q8N4G2 192 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 XXYLT1Q8NBI6 393 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 KLK6Q92876 244 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 TTC17Q96AE7 1141 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 MYEOVQ96EZ4 313 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
VPS29-209ENST00000551655 FZD3Q9NPG1 666 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 SLCO3A1Q9UIG8 710 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 SRPK3Q9UPE1 567 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 ITPR2Q14571 2701 aa14.98□□□□□ -0.01
VPS29-209ENST00000551655 UBE4BO95155 1302 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 RP1P56715 2156 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 LRRIQ3A6PVS8 624 aaPredicted RBP14.97□□□□□ -0.01
VPS29-209ENST00000551655 PPFIA2O75334 1257 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 C4BPAP04003 597 aaKnown RBP14.97□□□□□ -0.01
VPS29-209ENST00000551655 ITGB2P05107 769 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 WT1P19544 449 aaPredicted RBP14.97□□□□□ -0.01
VPS29-209ENST00000551655 C5AR1P21730 350 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 MZF1P28698 734 aaPredicted RBP14.97□□□□□ -0.01
VPS29-209ENST00000551655 SLC6A4P31645 630 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 HARS2P49590 506 aaKnown RBP14.97□□□□□ -0.01
VPS29-209ENST00000551655 PDX1P52945 283 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 ADGRF1Q5T601 910 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 PPP1R26Q5T8A7 1209 aaPredicted RBP14.97□□□□□ -0.01
VPS29-209ENST00000551655 EFL1Q7Z2Z2 1120 aaKnown RBP14.97□□□□□ -0.01
VPS29-209ENST00000551655 VASH2Q86V25 355 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 UNC93AQ86WB7 457 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 CLIC6Q96NY7 704 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 NOX5Q96PH1 765 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 SEMA3CQ99985 751 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 CALN1Q9BXU9 219 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 KLHL11Q9NVR0 708 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 NLGN3Q9NZ94 848 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 CCDC39Q9UFE4 941 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 STOML2Q9UJZ1 356 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 ERVW-1Q9UQF0 538 aa14.97□□□□□ -0.01
VPS29-209ENST00000551655 STX6O43752 255 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 MAGEC1O60732 1142 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 ALPPL2P10696 532 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 SLC5A2P31639 672 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 STK19P49842 368 aaPredicted RBP14.96□□□□□ -0.01
VPS29-209ENST00000551655 FOXK1P85037 733 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 OVGP1Q12889 678 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 FSCBQ5H9T9 825 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 PERM1Q5SV97 790 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 XKR5Q6UX68 686 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 RBM44Q6ZP01 1051 aaKnown RBP14.96□□□□□ -0.01
VPS29-209ENST00000551655 BHLHA9Q7RTU4 235 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 MFN1Q8IWA4 741 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 OR13H1Q8NG92 308 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 WDR36Q8NI36 951 aaKnown RBP14.96□□□□□ -0.01
VPS29-209ENST00000551655 HTR3CQ8WXA8 447 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 EDEM1Q92611 657 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 PTPRN2Q92932 1015 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 RPL10LQ96L21 214 aaKnown RBP14.96□□□□□ -0.01
VPS29-209ENST00000551655 PRICKLE1Q96MT3 831 aaPredicted RBP14.96□□□□□ -0.01
VPS29-209ENST00000551655 DUSP16Q9BY84 665 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 SLC25A18Q9H1K4 315 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 DMTF1Q9Y222 760 aa14.96□□□□□ -0.01
VPS29-209ENST00000551655 ICE1Q9Y2F5 2266 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms