RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 PPM1KQ8N3J5 372 aa15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 AADATQ8N5Z0 425 aa15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 EID2Q8N6I1 236 aa15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 OR2T34Q8NGX1 318 aa15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 CNDP2Q96KP4 475 aaKnown RBP15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 HSFY1Q96LI6 401 aa15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 NT5C1BQ96P26 610 aa15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 IRX2Q9BZI1 471 aaPredicted RBP15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 SCAND2PQ9GZW5 306 aaPredicted RBP15.34■□□□□ 0.05
TMEM106C-216ENST00000551305 ACACAQ13085 2346 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 A0A087WV48 116 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 TARSL2A2RTX5 802 aaKnown RBP15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 TYW5A2RUC4 315 aaKnown RBP15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 LRRC72A6NJI9 287 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 LUC7L3O95232 432 aaKnown RBP15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 LDOC1O95751 146 aaPredicted RBP15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 JUPP14923 745 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 CD38P28907 300 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 BNIP3Q12983 259 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 INAVAQ3KP66 663 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 SYPL2Q5VXT5 272 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 ISM2Q6H9L7 571 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 TAC4Q86UU9 113 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 TMPRSS12Q86WS5 348 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 LGI2Q8N0V4 545 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 ZNF557Q8N988 423 aaPredicted RBP15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 OR14C36Q8NHC7 312 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 LMO3Q8TAP4 145 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 SAP25Q8TEE9 199 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 PTPRN2Q92932 1015 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 SLC39A13Q96H72 371 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 DDX50Q9BQ39 737 aaKnown RBP15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 RMND1Q9NWS8 449 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 ADAMTS1Q9UHI8 967 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 TLR6Q9Y2C9 796 aa15.33■□□□□ 0.04
TMEM106C-216ENST00000551305 C10orf142B7Z368 130 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 FBXO21O94952 628 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 SRPRAP08240 638 aaKnown RBP15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 VAV1P15498 845 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 ABCB4P21439 1286 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 STK19P49842 368 aaPredicted RBP15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 METAP1P53582 386 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 ADPRHP54922 357 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 PPP2CBP62714 309 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 PPP2CAP67775 309 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 ECT2LQ008S8 904 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 ARID5BQ14865 1188 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 COBLL1Q53SF7 1204 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 RAP1GAP2Q684P5 730 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 ARHGEF19Q8IW93 802 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 CCDC117Q8IWD4 279 aaPredicted RBP15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 FMR1NBQ8N0W7 255 aaPredicted RBP15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 KDM1BQ8NB78 822 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 PIP4K2CQ8TBX8 421 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 SKA1Q96BD8 255 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 FAM149B1Q96BN6 582 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 SERAC1Q96JX3 654 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 SERPINB11Q96P15 392 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 ST7Q9NRC1 585 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 FZD4Q9ULV1 537 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 CEP83Q9Y592 693 aa15.32■□□□□ 0.04
TMEM106C-216ENST00000551305 EDDM13A0A1B0GTR0 161 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 GOT1P17174 413 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 TACR2P21452 398 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 ITPKBP27987 946 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 GPD2P43304 727 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 CCR5P51681 352 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 SFSWAPQ12872 951 aaKnown RBP15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 ZC3H12AQ5D1E8 599 aaKnown RBP15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 DENND1BQ6P3S1 775 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 SND1Q7KZF4 910 aaKnown RBP eCLIP15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 GSDMAQ96QA5 445 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 GDF3Q9NR23 364 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 PCDHGA1Q9Y5H4 931 aa15.31■□□□□ 0.04
TMEM106C-216ENST00000551305 ITIH6Q6UXX5 1313 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 LOC400499M0QZD8 3231 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TBC1D3DA0A087WVF3 549 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TBC1D3IA0A087WXS9 549 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TBC1D3EA0A087X179 549 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TBC1D3KA0A087X1G2 549 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TBC1D3FA6NER0 549 aaPredicted RBP15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TBC1D3LB9A6J9 549 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TLR4O00206 839 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TLX3O43711 291 aaPredicted RBP15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 RFPL3O75679 317 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 MOCS3O95396 460 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 IL1BP01584 269 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TBC1D3HP0C7X1 549 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 CD44P16070 742 aaKnown RBP15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 MZF1P28698 734 aaPredicted RBP15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 RPL34P49207 117 aaKnown RBP15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 ACADVLP49748 655 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 NXPH1P58417 271 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 PITX1P78337 314 aaPredicted RBP15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 LRRC63Q05C16 580 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TARDBPQ13148 414 aaKnown RBP eCLIP15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 STILQ15468 1287 aa15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 RNF219Q5W0B1 726 aaPredicted RBP15.3■□□□□ 0.04
TMEM106C-216ENST00000551305 TBC1D3GQ6DHY5 549 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms