RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	ACTL9	Q8TC94	416 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	PPM1E	Q8WY54	764 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	SUSD6	Q92537	303 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	HLA-C	Q95604	372 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	IGSF8	Q969P0	613 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	WBP2	Q969T9	261 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	CCDC114	Q96M63	670 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	GUCD1	Q96NT3	240 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	HERPUD2	Q9BSE4	406 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	BRD8	Q9H0E9	1235 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	LRRC19	Q9H756	370 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	RBM12	Q9NTZ6	932 aa	Known RBP	11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	TMEM248	Q9NWD8	314 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	MPP6	Q9NZW5	540 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	CDH22	Q9UJ99	828 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	NEU3	Q9UQ49	428 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	FAM50B	Q9Y247	325 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	C2orf16	Q68DN1	1984 aa		11.95	□□□□□ -0.5
CNOT2-223	ENST00000550160	NOTCH4	Q99466	2003 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	CFAP69	A5D8W1	941 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	HEPACAM2	A8MVW5	462 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	HACD1	B0YJ81	288 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160		H7C0C1	242 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	SCAMP3	O14828	347 aa	Known RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	LIAS	O43766	372 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	MFSD11	O43934	449 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	TBL1X	O60907	577 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	GAS8	O95995	478 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	LAMP2	P13473	410 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	ATP5O	P48047	213 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	NDST2	P52849	883 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	VCP	P55072	806 aa	Known RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	OXCT1	P55809	520 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	YBEY	P58557	167 aa	Predicted RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	RPS24	P62847	133 aa	Known RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	ADCY2	Q08462	1091 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	CDH18	Q13634	790 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	BYSL	Q13895	437 aa	Known RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	PDGFRL	Q15198	375 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	SIX1	Q15475	284 aa	Predicted RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	C6orf118	Q5T5N4	469 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	C8orf74	Q6P047	294 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	CCDC137	Q6PK04	289 aa	Known RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	MAATS1	Q7Z4T9	603 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	NLRP14	Q86W24	1093 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	KLHL7	Q8IXQ5	586 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	UMODL1-AS1	Q8N2C9	162 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	MMGT1	Q8N4V1	131 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	DDI1	Q8WTU0	396 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	DEPDC1B	Q8WUY9	529 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	C1orf54	Q8WWF1	131 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	ATG4A	Q8WYN0	398 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	NKD2	Q969F2	451 aa	Predicted RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	DCBLD2	Q96PD2	775 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	MYADM	Q96S97	322 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	DDX47	Q9H0S4	455 aa	Known RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	ETNK2	Q9NVF9	386 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	DUS2	Q9NX74	493 aa	Known RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	DTL	Q9NZJ0	730 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	ZNF148	Q9UQR1	794 aa		11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	HELZ	P42694	1942 aa	Known RBP	11.94	□□□□□ -0.5
CNOT2-223	ENST00000550160	DOCK6	Q96HP0	2047 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ARHGAP42	A6NI28	874 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	EFCAB8	A8MWE9	144 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160		H0Y626	953 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	TRDMT1	O14717	391 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	MTSS1	O43312	755 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	RAMP2	O60895	175 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	CNTN5	O94779	1100 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	STK10	O94804	968 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	NFATC1	O95644	943 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ECEL1	O95672	775 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ADH1C	P00326	375 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	RBP3	P10745	1247 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	PECAM1	P16284	738 aa	Predicted RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	COIL	P38432	576 aa	Predicted RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	VIPR2	P41587	438 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	GBE1	Q04446	702 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	SNX1	Q13596	522 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	DHX34	Q14147	1143 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	PUS10	Q3MIT2	529 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	PARP15	Q460N3	678 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	GLE1	Q53GS7	698 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ALF	Q53S48	1182 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	TEX35	Q5T0J7	233 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	DARS2	Q6PI48	645 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	NPNT	Q6UXI9	565 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	TPGS1	Q6ZTW0	290 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	GSTA5	Q7RTV2	222 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	SETD3	Q86TU7	594 aa	Predicted RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ZC3H18	Q86VM9	953 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	CIR1	Q86X95	450 aa	Predicted RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	CFAP52	Q8N1V2	620 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ATPAF2	Q8N5M1	289 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	CCNY	Q8ND76	341 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ATL2	Q8NHH9	583 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms