RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 OR12D3Q9UGF7 316 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 GGT7Q9UJ14 662 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 VANGL2Q9ULK5 521 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 PADI3Q9ULW8 664 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 MGAMO43451 1857 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 PDCD11Q14690 1871 aaKnown RBP9.17□□□□□ -0.94
TMEM116-209ENST00000550020 ARHGAP42A6NI28 874 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 CXorf49A8MYA2 514 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 HHLA1C9JL84 531 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 FYNP06241 537 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 COL6A1P12109 1028 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 MYL4P12829 197 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 PTPN3P26045 913 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 HOXD10P28358 340 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 TYK2P29597 1187 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 CD52P31358 61 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 HK2P52789 917 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 GEMP55040 296 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 KCNJ2P63252 427 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 ASPHQ12797 758 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 CDH17Q12864 832 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 DSC3Q14574 896 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 PPP2R5DQ14738 602 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 ZRSR2Q15696 482 aaKnown RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 CHI3L2Q15782 390 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 NFE2Q16621 373 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 PREPLQ4J6C6 727 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 TEX44Q53QW1 395 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 TAF1BQ53T94 588 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 KIAA0319Q5VV43 1072 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 HFE2Q6ZVN8 426 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 RNF180Q86T96 592 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 MTDHQ86UE4 582 aaKnown RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 CEP57Q86XR8 500 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 MPP5Q8N3R9 675 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 RNF169Q8NCN4 708 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 ARMC2Q8NEN0 867 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 TRPV1Q8NER1 839 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 ZMIZ2Q8NF64 920 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 PPP1R13LQ8WUF5 828 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 RSPH1Q8WYR4 309 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 TBC1D31Q96DN5 1066 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 OXNAD1Q96HP4 312 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 FUBP3Q96I24 572 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 HHIPL1Q96JK4 782 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 TEKT5Q96M29 485 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 SERPINB11Q96P15 392 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 KCNK16Q96T55 309 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 ADAM2Q99965 735 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 SEZ6LQ9BYH1 1024 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 MMADHCQ9H3L0 296 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 FBXO44Q9H4M3 255 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 ARHGEF38Q9NXL2 777 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
TMEM116-209ENST00000550020 HEY2Q9UBP5 337 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 DCTN4Q9UJW0 460 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 ANKRD6Q9Y2G4 727 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 RPS6KL1Q9Y6S9 549 aa9.16□□□□□ -0.94
TMEM116-209ENST00000550020 MYADML2A6NDP7 307 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 TMEM189-UBE2V1I3L0A0 370 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 ADAMTS4O75173 837 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 SNUPNO95149 360 aaKnown RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 PGK1P00558 417 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 SERPINE1P05121 402 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 ASGR1P07306 291 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 ITGA2BP08514 1039 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 KRT16P08779 473 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 DLDP09622 509 aaKnown RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 ESRRAP11474 423 aaPredicted RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 PAMP19021 973 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 BDNFP23560 247 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 TARSP26639 723 aaKnown RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 KPNA2P52292 529 aaKnown RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 NRG1Q02297 640 aaPredicted RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 YWHAHQ04917 246 aaPredicted RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 BMPR2Q13873 1038 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 WLSQ5T9L3 541 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 C6orf163Q5TEZ5 329 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 PDPK2PQ6A1A2 396 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 TRMT10BQ6PF06 316 aaKnown RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 TMEM135Q86UB9 458 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 TAC4Q86UU9 113 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 ATPAF2Q8N5M1 289 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 RDH11Q8TC12 318 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 DQX1Q8TE96 717 aaKnown RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 TRIB2Q92519 343 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 NDRG1Q92597 394 aaKnown RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 LPPQ93052 612 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 FATE1Q969F0 183 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 MCUR1Q96AQ8 359 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 SKA1Q96BD8 255 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 ZNF669Q96BR6 464 aaPredicted RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 RBBP8Q99708 897 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 FTHL17Q9BXU8 183 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 OXCT2Q9BYC2 517 aaPredicted RBP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.15□□□□□ -0.94
TMEM116-209ENST00000550020 TRPV6Q9H1D0 765 aa9.15□□□□□ -0.94
TMEM116-209ENST00000550020 SMOC2Q9H3U7 446 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms