RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 C11orf54Q9H0W9 315 aaPredicted RBP5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 ARMT1Q9H993 441 aa5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 SLC17A6Q9P2U8 582 aa5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 RABL2BQ9UNT1 228 aa5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 TMEM5Q9Y2B1 443 aa5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 MAN2B2Q9Y2E5 1009 aa5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 DDX49Q9Y6V7 483 aaKnown RBP5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 MON2Q7Z3U7 1717 aa5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 FNDC1Q4ZHG4 1894 aaPredicted RBP5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 ARHGEF10O15013 1369 aa5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 CPS1P31327 1500 aa5.4□□□□□ -1.54
ATP2B1-206ENST00000549727 RIMBP3CA6NJZ7 1639 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 RIMBP3BA6NNM3 1639 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 RIMBP3Q9UFD9 1639 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 ITSN1Q15811 1721 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 AQP12BA6NM10 295 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 PODXLO00592 558 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 YY2O15391 372 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 TEX33O43247 280 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 PEX1O43933 1283 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 BAG4O95429 457 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 MT-ND3P03897 115 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 A1BGP04217 495 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 GNAI2P04899 355 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 ANXA2P07355 339 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 ITGA2BP08514 1039 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 CDK4P11802 303 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 HNF4AP41235 474 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 PHKA1P46020 1223 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 CCR9P51686 369 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 MC2RQ01718 297 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 NOGQ13253 232 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 SNAPC2Q13487 334 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 RRS1Q15050 365 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 RAB30Q15771 203 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 ASIC2Q16515 512 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 UTP14CQ5TAP6 766 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 GPR139Q6DWJ6 353 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 PEG10Q86TG7 708 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 SAMD14Q8IZD0 417 aaPredicted RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 OR8H3Q8N146 312 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 TBC1D22AQ8WUA7 517 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 RUFY2Q8WXA3 655 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 TMEM125Q96AQ2 219 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 NMD3Q96D46 503 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 MED15Q96RN5 788 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 DMRTA2Q96SC8 542 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 GDF15Q99988 308 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 DDX23Q9BUQ8 820 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 GPR63Q9BZJ6 419 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 EPS8L2Q9H6S3 715 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 SEPSECSQ9HD40 501 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 CCDC177Q9NQR7 707 aaPredicted RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 RNF7Q9UBF6 113 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 PI4KBQ9UBF8 816 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 ADD3Q9UEY8 706 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 TSPYL4Q9UJ04 414 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 RPS6KA6Q9UK32 745 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 ADAM21Q9UKJ8 722 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 GTF3C4Q9UKN8 822 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 TBX20Q9UMR3 447 aa5.4□□□□□ -1.55
ATP2B1-206ENST00000549727 RTL1A6NKG5 1358 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 METP08581 1390 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 TNRQ92752 1358 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 AKAP12Q02952 1782 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 SETD1AO15047 1707 aaKnown RBP5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 ACEP12821 1306 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 FLT1P17948 1338 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 NRKQ7Z2Y5 1582 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 C3P01024 1663 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 hCG_1807616A0A1W2PRN6 198 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 A0A1W2PS29 197 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 FAM171A2A8MVW0 826 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 ADM5C9JUS6 153 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 GRM6O15303 877 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 SGTAO43765 313 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 PROP1O75360 226 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 SUN1O94901 812 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 TGDSO95455 350 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 MBD3O95983 291 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 QDPRP09417 244 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 CLTBP09497 229 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 SRGAP2BP0DMP2 458 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 MYL4P12829 197 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 ALAS1P13196 640 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 PSMA4P25789 261 aaKnown RBP5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 SUMO3P55854 103 aaPredicted RBP5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 ACTR2P61160 394 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 SLC12A1Q13621 1099 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 TAF7Q15545 349 aaPredicted RBP5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 KRTCAP3Q53RY4 240 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 SNX30Q5VWJ9 437 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 NAA35Q5VZE5 725 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 ARL6IP4Q66PJ3 421 aaKnown RBP5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 KAZNQ674X7 775 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 NFRKBQ6P4R8 1299 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 KLHL17Q6TDP4 642 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 UNC5DQ6UXZ4 953 aa5.39□□□□□ -1.55
ATP2B1-206ENST00000549727 ZNF783Q6ZMS7 281 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms