RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 TTC31Q49AM3 519 aaPredicted RBP16.13■□□□□ 0.17
TCHP-208ENST00000549550 C6orf118Q5T5N4 469 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 CHST9Q7L1S5 443 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 GATAD2AQ86YP4 633 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 CREBRFQ8IUR6 639 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 FAM186BQ8IYM0 893 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 ARHGAP18Q8N392 663 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 WFIKKN2Q8TEU8 576 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 PLD4Q96BZ4 506 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 ACE2Q9BYF1 805 aaPredicted RBP16.13■□□□□ 0.17
TCHP-208ENST00000549550 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
TCHP-208ENST00000549550 PRORYQ9H606 182 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 FBRSQ9HAH7 460 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 CYP3A43Q9HB55 503 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 SGK2Q9HBY8 427 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 PRSS16Q9NQE7 514 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 ABCB8Q9NUT2 735 aa16.13■□□□□ 0.17
TCHP-208ENST00000549550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.13■□□□□ 0.17
TCHP-208ENST00000549550 A0A1B0GTQ1 180 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 CBX4O00257 560 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 ENC1O14682 589 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 PMM2O15305 246 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 P4HA2O15460 535 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 TLX3O43711 291 aaPredicted RBP16.12■□□□□ 0.17
TCHP-208ENST00000549550 IGHV4-34P06331 123 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 KRT13P13646 458 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 PDE4CQ08493 712 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 TRIP4Q15650 581 aaPredicted RBP16.12■□□□□ 0.17
TCHP-208ENST00000549550 ZNF394Q53GI3 561 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 PRAMEF14Q5SWL7 426 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 CEP135Q66GS9 1140 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 SMYD5Q6GMV2 418 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 LRRC69Q6ZNQ3 347 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 ADIPOR2Q86V24 386 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 ZNF397Q8NF99 534 aaPredicted RBP16.12■□□□□ 0.17
TCHP-208ENST00000549550 DNAI2Q9GZS0 605 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 NIF3L1Q9GZT8 377 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 GGA2Q9UJY4 613 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 PCDHGA1Q9Y5H4 931 aa16.12■□□□□ 0.17
TCHP-208ENST00000549550 FAM47DPA6NHR8 397 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 PES1O00541 588 aaKnown RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 VILLO15195 856 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 CCP110O43303 1012 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 RFPL3O75679 317 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 LDOC1O95751 146 aaPredicted RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 AFPP02771 609 aaKnown RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 HARS2P49590 506 aaKnown RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 RACK1P63244 317 aaKnown RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 DNAJC3Q13217 504 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 RAB41Q5JT25 222 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 ZNF776Q68DI1 518 aaPredicted RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 KIAA0895LQ68EN5 471 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 PIGZQ86VD9 579 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 FMNL3Q8IVF7 1028 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 AHI1Q8N157 1196 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 TAS1R2Q8TE23 839 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 CNDP2Q96KP4 475 aaKnown RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 HEXIM2Q96MH2 286 aaKnown RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 SLC6A18Q96N87 628 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 FCRL3Q96P31 734 aaPredicted RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 ELF4Q99607 663 aaPredicted RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 KCND1Q9NSA2 647 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 CAPN11Q9UMQ6 739 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 RAI2Q9Y5P3 530 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 AK5Q9Y6K8 562 aa16.11■□□□□ 0.17
TCHP-208ENST00000549550 ARID1BQ8NFD5 2236 aaPredicted RBP16.11■□□□□ 0.17
TCHP-208ENST00000549550 RRP8O43159 456 aaKnown RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 ZNF500O60304 480 aaPredicted RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 MFAP3LO75121 409 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 DLDP09622 509 aaKnown RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 PABPC1P11940 636 aaKnown RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 ABCB4P21439 1286 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 FECHP22830 423 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 GCLMP48507 274 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 VAMP7P51809 220 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 TKTL1P51854 596 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 TARDBPQ13148 414 aaKnown RBP eCLIP16.1■□□□□ 0.17
TCHP-208ENST00000549550 TSR1Q2NL82 804 aaKnown RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 MBLAC2Q68D91 279 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 KIAA0907Q7Z7F0 614 aaPredicted RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.1■□□□□ 0.17
TCHP-208ENST00000549550 NDRG1Q92597 394 aaKnown RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 GOLGA1Q92805 767 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 TMA16Q96EY4 203 aaKnown RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 NCKAP1Q9Y2A7 1128 aa16.1■□□□□ 0.17
TCHP-208ENST00000549550 LUC7L2Q9Y383 392 aaKnown RBP16.1■□□□□ 0.17
TCHP-208ENST00000549550 DOCK9Q9BZ29 2069 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 MAST4O15021 2626 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 A0A1W2PPC4 97 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 ARHGAP6O43182 974 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 ZBED1O96006 694 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 ATP5BP06576 529 aaKnown RBP16.09■□□□□ 0.17
TCHP-208ENST00000549550 ITGAVP06756 1048 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 C1SP09871 688 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 CDK4P11802 303 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 PLA2G2AP14555 144 aa16.09■□□□□ 0.17
TCHP-208ENST00000549550 GTF2H1P32780 548 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms