RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 MAML3Q96JK9 1138 aa16.63■□□□□ 0.25
CUX1-213ENST00000549414 C2orf81A6NN90 581 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 IL10P22301 178 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 NAGLUP54802 743 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 MAXP61244 160 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 ST8SIA6P61647 398 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 CERS2Q96G23 380 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 SERPINB11Q96P15 392 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 DCLRE1BQ9H816 532 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.62■□□□□ 0.25
CUX1-213ENST00000549414 RNF112Q9ULX5 631 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 PIRTP0C851 137 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 ASPAP45381 313 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 NOGQ13253 232 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 BTG3Q14201 252 aaPredicted RBP16.62■□□□□ 0.25
CUX1-213ENST00000549414 TCHHL1Q5QJ38 904 aaPredicted RBP16.62■□□□□ 0.25
CUX1-213ENST00000549414 PCYOX1LQ8NBM8 494 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 CEP70Q8NHQ1 597 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 CLEC4CQ8WTT0 213 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 DDI1Q8WTU0 396 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 DUSP16Q9BY84 665 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 WARS2Q9UGM6 360 aaKnown RBP16.62■□□□□ 0.25
CUX1-213ENST00000549414 PACSIN3Q9UKS6 424 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 PCDHGC3Q9UN70 934 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 SLC27A5Q9Y2P5 690 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 ENO4A6NNW6 628 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 HIST1H2AGP0C0S8 130 aaPredicted RBP16.62■□□□□ 0.25
CUX1-213ENST00000549414 OR4Q2P0C623 313 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 ZCCHC18P0CG32 403 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 HIST1H2ADP20671 130 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 FAM110CQ1W6H9 321 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 SPANXN3Q5MJ09 141 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 LGI2Q8N0V4 545 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 SPATA6LQ8N4H0 392 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 LPCAT1Q8NF37 534 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 PBXIP1Q96AQ6 731 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 HIST1H2AHQ96KK5 128 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 HIST1H2AJQ99878 128 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 H2AFJQ9BTM1 129 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 CCDC90BQ9GZT6 254 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 NMRAL1Q9HBL8 299 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 ENTPD7Q9NQZ7 604 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 TLR8Q9NR97 1041 aaKnown RBP16.62■□□□□ 0.25
CUX1-213ENST00000549414 ZDHHC18Q9NUE0 388 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 ACTL7BQ9Y614 415 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 KIAA0100Q14667 2235 aaKnown RBP16.62■□□□□ 0.25
CUX1-213ENST00000549414 TTC36A6NLP5 189 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 SERPINF2P08697 491 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 ITGB6P18564 788 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 CDK16Q00536 496 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 LAMB3Q13751 1172 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 DDR2Q16832 855 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 GRTP1Q5TC63 336 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 OTOAQ7RTW8 1153 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 RNF217Q8TC41 542 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 FBXO44Q9H4M3 255 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 MARCH2Q9P0N8 246 aa16.62■□□□□ 0.25
CUX1-213ENST00000549414 TRPC5OSA6NMA1 111 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 GLP2RO95838 553 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 PRKAR2AP13861 404 aaKnown RBP16.61■□□□□ 0.25
CUX1-213ENST00000549414 CDC25CP30307 473 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 NDUFV1P49821 464 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 PHEXP78562 749 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 BTKQ06187 659 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 POLD3Q15054 466 aaPredicted RBP16.61■□□□□ 0.25
CUX1-213ENST00000549414 RAP1GAP2Q684P5 730 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 CYP4X1Q8N118 509 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 GLIS1Q8NBF1 620 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 LMO3Q8TAP4 145 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 CPNE1Q99829 537 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 CDHR5Q9HBB8 845 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 SYBUQ9NX95 663 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 MPP6Q9NZW5 540 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 THEGQ9P2T0 379 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 KAT6AQ92794 2004 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 NT5C1B-RDH14C9J2C7 533 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 MSI1O43347 362 aaKnown RBP16.61■□□□□ 0.25
CUX1-213ENST00000549414 TBL1YQ9BQ87 522 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 CXorf56Q9H5V9 222 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 MYH7P12883 1935 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 KNL1Q8NG31 2342 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 THRAP10827 490 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 FUT11Q495W5 492 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 GALNTL6Q49A17 601 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 TEDDM1Q5T9Z0 273 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 FIZ1Q96SL8 496 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 ATP13A1Q9HD20 1204 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 STARD13Q9Y3M8 1113 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 IRS2Q9Y4H2 1338 aa16.61■□□□□ 0.25
CUX1-213ENST00000549414 MAGEB16A2A368 324 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 C2orf71A6NGG8 1288 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 TULP2O00295 520 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 ZMPSTE24O75844 475 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 RGS20O76081 388 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 DDHD2O94830 711 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 URODP06132 367 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 IL1R2P27930 398 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 RGS4P49798 205 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 RHOAP61586 193 aa16.6■□□□□ 0.25
CUX1-213ENST00000549414 AGKQ53H12 422 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms