RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ITGAXP20702 1163 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 GP5P40197 560 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 GARSP41250 739 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 PTPN9P43378 593 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 NUDT2P50583 147 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 DLG1Q12959 904 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 MED21Q13503 144 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 NOL9Q5SY16 702 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 C4orf22Q6V702 233 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 TIFABQ6ZNK6 161 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 SDCCAG8Q86SQ7 713 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 SPNS2Q8IVW8 549 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 ACVR1CQ8NER5 493 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 CMTM5Q96DZ9 223 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 GCNAQ96QF7 691 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 OR52B2Q96RD2 323 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 TUT1Q9H6E5 874 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 CDHR5Q9HBB8 845 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 CACNG4Q9UBN1 327 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 GJD2Q9UKL4 321 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 FIS1Q9Y3D6 152 aa12.22□□□□□ -0.45
RAPGEF3-219ENST00000549151 PRKCGP05129 697 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 CHRNGP07510 517 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 BCAT1P54687 386 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 RBBP5Q15291 538 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 MMEL1Q495T6 779 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 PPM1LQ5SGD2 360 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 CERCAMQ5T4B2 595 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 SYPL2Q5VXT5 272 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 BEST2Q8NFU1 509 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 PPP2R3CQ969Q6 453 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 SCYL1Q96KG9 808 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 PDP2Q9P2J9 529 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 SLC39A10Q9ULF5 831 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 EEF2KO00418 725 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 SPTLC1O15269 473 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 BUD23O43709 281 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 RECQL4O94761 1208 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 COX4I1P13073 169 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 GRK2P25098 689 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 EPHA3P29320 983 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 BAG6P46379 1132 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 TMCO4Q5TGY1 634 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 CWF19L1Q69YN2 538 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 FSTL4Q6MZW2 842 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 SPATA6LQ8N4H0 392 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 TTC39CQ8N584 583 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 ANKRD52Q8NB46 1076 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 USP13Q92995 863 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 LENG8Q96PV6 779 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 C1orf21Q9H246 121 aa12.21□□□□□ -0.45
RAPGEF3-219ENST00000549151 PTPRFP10586 1907 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 FAM72CH0Y354 149 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 PHGDHO43175 533 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 SLC25A27O95847 323 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 SETSIPP0DME0 302 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 TCN1P20061 433 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 MPSTP25325 297 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 CRABP2P29373 138 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 TKTP29401 623 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 GSTT1P30711 240 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 FAM187BQ17R55 369 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 FAM72AQ5TYM5 149 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 FAM72DQ6L9T8 149 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 FAM72BQ86X60 149 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 TDRD5Q8NAT2 981 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 USP33Q8TEY7 942 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 MED10Q9BTT4 135 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 KLHL4Q9C0H6 718 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 IARS2Q9NSE4 1012 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 C20orf96Q9NUD7 363 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 SSX2IPQ9Y2D8 614 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 SNX10Q9Y5X0 201 aa12.21□□□□□ -0.46
RAPGEF3-219ENST00000549151 CAPN8A6NHC0 703 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 BEST1O76090 585 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 ALDH1A2O94788 518 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 PGM3O95394 542 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 PKNOX1P55347 436 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 GRIK4Q16099 956 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 FBXO47Q5MNV8 452 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 GALNT15Q8N3T1 639 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 SLC7A14Q8TBB6 771 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 ACMSDQ8TDX5 336 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 IFT43Q96FT9 208 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 NR1H4Q96RI1 486 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 TASP1Q9H6P5 420 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 GPAMQ9HCL2 828 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 CHRAC1Q9NRG0 131 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 BFARQ9NZS9 450 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 VANGL2Q9ULK5 521 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 AK5Q9Y6K8 562 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 ZNF638Q14966 1978 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 TK2O00142 265 aa12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 SNUPNO95149 360 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-219ENST00000549151 GRM5P41594 1212 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms