RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 C6orf89Q6UWU4 347 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 PIGWQ7Z7B1 504 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 DEFB128Q7Z7B8 93 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 SLC26A11Q86WA9 606 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 LRRC6Q86X45 466 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 TBC1D31Q96DN5 1066 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 STAMBPL1Q96FJ0 436 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 TRHDEQ9UKU6 1024 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 HS3ST4Q9Y661 456 aa21.47■■□□□ 1.03
RITA1-201ENST00000548278 ZNF33AQ06730 810 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 SMARCB1Q12824 385 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 TRIM60Q495X7 471 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 TRMT10BQ6PF06 316 aaKnown RBP21.46■■□□□ 1.03
RITA1-201ENST00000548278 ANKS3Q6ZW76 656 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 ARHGAP12Q8IWW6 846 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 CACNA2D3Q8IZS8 1091 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 PPM1NQ8N819 430 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 SPATA17Q96L03 361 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 MAGEB18Q96M61 343 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 TOX2Q96NM4 488 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 VAT1Q99536 393 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 GBA3Q9H227 469 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 ZNF180Q9UJW8 692 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 WDR27A2RRH5 827 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 FAM159BA6NKW6 160 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 RTN3O95197 1032 aaPredicted RBP21.46■■□□□ 1.03
RITA1-201ENST00000548278 MOCS2O96007 188 aaPredicted RBP21.46■■□□□ 1.03
RITA1-201ENST00000548278 HAPLN1P10915 354 aaPredicted RBP21.46■■□□□ 1.03
RITA1-201ENST00000548278 CA4P22748 312 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 IL9RQ01113 521 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 SPARCL1Q14515 664 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.46■■□□□ 1.03
RITA1-201ENST00000548278 MICALCLQ6ZW33 695 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 C14orf80Q86SX3 495 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 ARNTL2Q8WYA1 636 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 FBXO32Q969P5 355 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 C1orf74Q96LT6 269 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 TSGA13Q96PP4 275 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 CATSPERBQ9H7T0 1116 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 PIH1D1Q9NWS0 290 aaKnown RBP21.46■■□□□ 1.03
RITA1-201ENST00000548278 CLIC5Q9NZA1 410 aa21.46■■□□□ 1.03
RITA1-201ENST00000548278 ATXN2Q99700 1313 aaKnown RBP21.45■■□□□ 1.02
RITA1-201ENST00000548278 SUN1O94901 812 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 EFEMP2O95967 443 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 MGAT1P26572 445 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 TUBP50607 506 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 MLLT6P55198 1093 aaPredicted RBP21.45■■□□□ 1.02
RITA1-201ENST00000548278 SESN2P58004 480 aaPredicted RBP21.45■■□□□ 1.02
RITA1-201ENST00000548278 COG7P83436 770 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 MGAT5BQ3V5L5 792 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 PRSS55Q6UWB4 352 aaPredicted RBP21.45■■□□□ 1.02
RITA1-201ENST00000548278 CYS1Q717R9 158 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 CTAGE3PQ8IX95 158 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 AGAP3Q96P47 875 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 SEPT5Q99719 369 aaPredicted RBP21.45■■□□□ 1.02
RITA1-201ENST00000548278 OXCT2Q9BYC2 517 aaPredicted RBP21.45■■□□□ 1.02
RITA1-201ENST00000548278 MOCS1Q9NZB8 636 aa21.45■■□□□ 1.02
RITA1-201ENST00000548278 E9PAM4 449 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 FAM155BO75949 473 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 AP2A1O95782 977 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 SLC2A3P11169 496 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 FOXN2P32314 431 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 TBX4P57082 545 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 CRADDP78560 199 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 SLC1A5Q15758 541 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 PIK3R6Q5UE93 754 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 KCTD11Q693B1 232 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 SH2D5Q6ZV89 423 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 LZTR1Q8N653 840 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 BANPQ8N9N5 519 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 ALKBH8Q96BT7 664 aaKnown RBP21.44■■□□□ 1.02
RITA1-201ENST00000548278 TEKT5Q96M29 485 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 TGS1Q96RS0 853 aaKnown RBP21.44■■□□□ 1.02
RITA1-201ENST00000548278 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.44■■□□□ 1.02
RITA1-201ENST00000548278 DFFAO00273 331 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 ALDH1A2O94788 518 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 MT-ND3P03897 115 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 GBP2P32456 591 aaPredicted RBP21.44■■□□□ 1.02
RITA1-201ENST00000548278 TAF10Q12962 218 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 DUSP4Q13115 394 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 RASIP1Q5U651 963 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 TTC39BQ5VTQ0 682 aaPredicted RBP21.44■■□□□ 1.02
RITA1-201ENST00000548278 ITPRIPL1Q6GPH6 555 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 ARHGAP36Q6ZRI8 547 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 C2orf15Q8WU43 125 aaKnown RBP21.44■■□□□ 1.02
RITA1-201ENST00000548278 OXNAD1Q96HP4 312 aaPredicted RBP21.44■■□□□ 1.02
RITA1-201ENST00000548278 SERAC1Q96JX3 654 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 CRISPLD2Q9H0B8 497 aa21.44■■□□□ 1.02
RITA1-201ENST00000548278 NSRP1Q9H0G5 558 aaKnown RBP21.44■■□□□ 1.02
RITA1-201ENST00000548278 JCHAINP01591 159 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 CSH1P0DML2 217 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 CSH2P0DML3 217 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 TAC1P20366 129 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 CCNCP24863 283 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 PSEN1P49768 467 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 EFEMP1Q12805 493 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 OLIG2Q13516 323 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 AFMIDQ63HM1 303 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 CASC4Q6P4E1 433 aa21.43■■□□□ 1.02
RITA1-201ENST00000548278 CCNJLQ8IV13 435 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms