RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 DRGXA6NNA5 263 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 DCLK1O15075 740 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 CCP110O43303 1012 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 CNTN5O94779 1100 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 PRKCHP24723 683 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 HNRNPH3P31942 346 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 OGDHQ02218 1023 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 ZNF177Q13360 481 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 STARD3Q14849 445 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 PLEKHG6Q3KR16 790 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 ARL13BQ3SXY8 428 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 FNDC3BQ53EP0 1204 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 USP39Q53GS9 565 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 ARTNQ5T4W7 220 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 CXorf57Q6NSI4 855 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 SARM1Q6SZW1 724 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 LRRC31Q6UY01 552 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 APCDD1Q8J025 514 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 CNPY3Q9BT09 278 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 RBSNQ9H1K0 784 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 TMEM245Q9H330 911 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 ARHGAP20Q9P2F6 1191 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 CNOT8Q9UFF9 292 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 OTOGLQ3ZCN5 2332 aa19.3■□□□□ 0.68
PRPF40B-206ENST00000547764 FAM186AA6NE01 2351 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 PTPRZ1P23471 2315 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 EP300Q09472 2414 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 IGLV3-10A0A075B6K4 115 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 E9PAM4 449 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 ZBTB24O43167 697 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 SRGAP2O75044 1071 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 CLDN11O75508 207 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 MOCS3O95396 460 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 EPHX1P07099 455 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 HLA-EP13747 358 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 MZF1P28698 734 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 CDH4P55283 916 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 SLC12A1Q13621 1099 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 ALFQ53S48 1182 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 KBTBD6Q86V97 674 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 DRC7Q8IY82 874 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 CCDC185Q8N715 623 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 OR8K1Q8NGG5 319 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 OR52K2Q8NGK3 314 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 RLN3Q8WXF3 142 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 ZNF653Q96CK0 615 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 DNAJC7Q99615 494 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 MPP6Q9NZW5 540 aa19.29■□□□□ 0.68
PRPF40B-206ENST00000547764 A0A087X0T9 212 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 SYNCRIPO60506 623 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 ASLP04424 464 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 FAM228BP0C875 321 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 MYBL1P10243 752 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 NDUFV2P19404 249 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 CTSOP43234 321 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 NUMBP49757 651 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 PLK1P53350 603 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 OXCT1P55809 520 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 LAIR1Q6GTX8 287 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 FAM160A2Q8N612 972 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 ZNF366Q8N895 744 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 RUBCNQ92622 972 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 TRIM11Q96F44 468 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 MRGPRX3Q96LB0 322 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 MRGPRX1Q96LB2 322 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 MAGEB5Q9BZ81 275 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 TRIM5Q9C035 493 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 OSBPL2Q9H1P3 480 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 SLC6A17Q9H1V8 727 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 OR12D3Q9UGF7 316 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 TBC1D30Q9Y2I9 924 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 SDK1Q7Z5N4 2213 aa19.28■□□□□ 0.68
PRPF40B-206ENST00000547764 MUC22E2RYF6 1773 aaPredicted RBP19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 TMEM191CA6NGB0 347 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 TPM1P09493 284 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 EIF4A3P38919 411 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 P2RY2P41231 377 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 ARID5BQ14865 1188 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 PLK5Q496M5 336 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 SCYL2Q6P3W7 929 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 TMC6Q7Z403 805 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 GAS2L3Q86XJ1 694 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 DCLK2Q8N568 766 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 FRMD1Q8N878 549 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 NTAN1Q96AB6 310 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 ALG14Q96F25 216 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 MYO19Q96H55 970 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 ZC3H10Q96K80 434 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 HINFPQ9BQA5 517 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 FEM1AQ9BSK4 669 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 TRIM7Q9C029 511 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 MKRN2Q9H000 416 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 NCDNQ9UBB6 729 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 MYO1AQ9UBC5 1043 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 ERVW-1Q9UQF0 538 aa19.27■□□□□ 0.68
PRPF40B-206ENST00000547764 CKAP5Q14008 2032 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 FAM72CH0Y354 149 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 BCKDHBP21953 392 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms