RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 EIF4HQ15056 248 aaKnown RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 PPP6R3Q5H9R7 873 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 FAM72AQ5TYM5 149 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 LRRC38Q5VT99 294 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 DAB2IPQ5VWQ8 1189 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 NAIF1Q69YI7 327 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 SDE2Q6IQ49 451 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 FAM72DQ6L9T8 149 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 POLNQ7Z5Q5 900 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 DAAM2Q86T65 1068 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 FAM72BQ86X60 149 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 RHOT1Q8IXI2 618 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 ZNF683Q8IZ20 524 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 AHI1Q8N157 1196 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 ZNF687Q8N1G0 1237 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 PHTF2Q8N3S3 785 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 KCTD6Q8NC69 237 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 KIAA1524Q8TCG1 905 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 IER2Q9BTL4 223 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 MAGEB5Q9BZ81 275 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 GPATCH2LQ9NWQ4 482 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 ELOVL2Q9NXB9 296 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 MPP6Q9NZW5 540 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 CLEC4EQ9ULY5 219 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 PLA2G4CQ9UP65 541 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 TBC1D30Q9Y2I9 924 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 STARD13Q9Y3M8 1113 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 TECTAO75443 2155 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 MACROD2A1Z1Q3 448 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 FAM86C2PA6NEL3 165 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 H3BRJ5 948 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 NPC1O15118 1278 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 TRIM24O15164 1050 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 PI15O43692 258 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 CNTN5O94779 1100 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 DCNP07585 359 aaKnown RBP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 RHOCP08134 193 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 COMTP21964 271 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 HLA-FP30511 346 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 ETFBP38117 255 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 MAPKAPK2P49137 400 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 SLC25A11Q02978 314 aaKnown RBP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 SULT2A1Q06520 285 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 FZD5Q13467 585 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 PDK2Q15119 407 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 DPYSL2Q16555 572 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 SMTNL2Q2TAL5 461 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 HSF5Q4G112 596 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 ALFQ53S48 1182 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 KCNT1Q5JUK3 1230 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 MANEALQ5VSG8 457 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 CWF19L1Q69YN2 538 aaKnown RBP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 C11orf63Q6NUN7 778 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 ZNF783Q6ZMS7 281 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 ZNF662Q6ZS27 426 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 TRMT11Q7Z4G4 463 aaKnown RBP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 KIAA0907Q7Z7F0 614 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 CIR1Q86X95 450 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 CCDC105Q8IYK2 499 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 SYCE1Q8N0S2 351 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 UBE2Q2Q8WVN8 375 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 P2RY11Q96G91 374 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 CIPCQ9C0C6 399 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 TMEM248Q9NWD8 314 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 DDX56Q9NY93 547 aaKnown RBP14.16□□□□□ -0.14
PTCH1-213ENST00000546820 GUCA1BQ9UMX6 200 aa14.16□□□□□ -0.14
PTCH1-213ENST00000546820 ILVBLA1L0T0 632 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 ZSCAN12O43309 604 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 RNF40O75150 1001 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 ASLP04424 464 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 TCF4P15884 667 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 AVPR2P30518 371 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 HOXC13P31276 330 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 CD70P32970 193 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 GJC1P36383 396 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 PLK1P53350 603 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 CDH6P55285 790 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 SEC13P55735 322 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 LMAN2Q12907 356 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 SEMA3BQ13214 749 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 CA9Q16790 459 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 GEN1Q17RS7 908 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 FSCBQ5H9T9 825 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 RNF219Q5W0B1 726 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-213ENST00000546820 RFX8Q6ZV50 586 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 CYP4V2Q6ZWL3 525 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-213ENST00000546820 TFAP2DQ7Z6R9 452 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 ZNF830Q96NB3 372 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-213ENST00000546820 KCTD15Q96SI1 283 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-213ENST00000546820 FEM1AQ9BSK4 669 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 MUC3BQ9H195 1237 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 CHRDQ9H2X0 955 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 RBM12Q9NTZ6 932 aaKnown RBP14.15□□□□□ -0.14
PTCH1-213ENST00000546820 RCOR3Q9P2K3 495 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-213ENST00000546820 SALL4Q9UJQ4 1053 aa14.15□□□□□ -0.14
PTCH1-213ENST00000546820 WASH4PA8MWX3 477 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 CHURC1-FNTBB4DL54 471 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms