RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 ACACAQ13085 2346 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 STC2O76061 302 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 NFATC1O95644 943 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 FYNP06241 537 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 SYPP08247 313 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 HMBSP08397 361 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 KRT3P12035 628 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 TBX4P57082 545 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 ZXDBP98169 803 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 MTA1Q13330 715 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 SLC18A3Q16572 532 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 CCDC122Q5T0U0 273 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 SYPL2Q5VXT5 272 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 NUGGCQ68CJ6 796 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 ALKBH5Q6P6C2 394 aaKnown RBP13.89□□□□□ -0.19
RAB5B-203ENST00000546810 HTR3DQ70Z44 454 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 SND1Q7KZF4 910 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAB5B-203ENST00000546810 ALLCQ8N6M5 410 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 TXNDC5Q8NBS9 432 aaKnown RBP13.89□□□□□ -0.19
RAB5B-203ENST00000546810 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 HMGB4Q8WW32 186 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 PIWIL1Q96J94 861 aaKnown RBP13.89□□□□□ -0.19
RAB5B-203ENST00000546810 FAM204AQ9H8W3 233 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
RAB5B-203ENST00000546810 METTL5Q9NRN9 209 aaKnown RBP13.89□□□□□ -0.19
RAB5B-203ENST00000546810 PARVAQ9NVD7 372 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 TAS2R14Q9NYV8 317 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 DKK4Q9UBT3 224 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 APOBEC2Q9Y235 224 aaKnown RBP13.89□□□□□ -0.19
RAB5B-203ENST00000546810 TLR6Q9Y2C9 796 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 PAXBP1Q9Y5B6 917 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 CELSR3Q9NYQ7 3312 aa13.89□□□□□ -0.19
RAB5B-203ENST00000546810 TNRC6BQ9UPQ9 1833 aaKnown RBP13.89□□□□□ -0.19
RAB5B-203ENST00000546810 A0A087X0T9 212 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 SGK1O00141 431 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 KLF8O95600 359 aaPredicted RBP13.88□□□□□ -0.19
RAB5B-203ENST00000546810 TRUB2O95900 331 aaKnown RBP13.88□□□□□ -0.19
RAB5B-203ENST00000546810 F9P00740 461 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 FAM228BP0C875 321 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 SLC2A3P11169 496 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 SULT1E1P49888 294 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 GSDMDP57764 484 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
RAB5B-203ENST00000546810 DCUN1D2Q6PH85 259 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 TAC4Q86UU9 113 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 NAXDQ8IW45 347 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 PGBD3Q8N328 593 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 DEFB119Q8N690 84 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 IL17RCQ8NAC3 791 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 RNF34Q969K3 372 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 ZNF653Q96CK0 615 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 CRELD1Q96HD1 420 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 LINC00597Q9H2U6 94 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 MRPL47Q9HD33 250 aaKnown RBP13.88□□□□□ -0.19
RAB5B-203ENST00000546810 SLC12A6Q9UHW9 1150 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 TMEM59LQ9UK28 342 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 SCINQ9Y6U3 715 aa13.88□□□□□ -0.19
RAB5B-203ENST00000546810 SIGLEC16A6NMB1 481 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 CYSRT1A8MQ03 144 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 M0QYT0 321 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 TK2O00142 265 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 IRAK2O43187 625 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 MSI1O43347 362 aaKnown RBP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 C1QL1O75973 258 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 LATS1O95835 1130 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 APOEP02649 317 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 PDGFRAP16234 1089 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 RRM1P23921 792 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 CORO1AP31146 461 aaKnown RBP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 SDC4P31431 198 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 TIE1P35590 1138 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 CYLC1P35663 651 aaPredicted RBP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 CHKAP35790 457 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 SLC11A2P49281 568 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 ZNF33AQ06730 810 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 ASTE1Q2TB18 679 aaPredicted RBP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 HSF5Q4G112 596 aaPredicted RBP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 EOGTQ5NDL2 527 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 C10orf76Q5T2E6 689 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 SLC36A4Q6YBV0 504 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 PHLDB2Q86SQ0 1253 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 CCDC170Q8IYT3 715 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 SLC39A7Q92504 469 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 NPY6RQ99463 290 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 CHP1Q99653 195 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 DDX50Q9BQ39 737 aaKnown RBP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 LUC7LQ9NQ29 371 aaKnown RBP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 DDIT4Q9NX09 232 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 CNOT8Q9UFF9 292 aaKnown RBP13.87□□□□□ -0.19
RAB5B-203ENST00000546810 PI4KAP42356 2102 aa13.87□□□□□ -0.19
RAB5B-203ENST00000546810 GON4LQ3T8J9 2241 aa13.86□□□□□ -0.19
RAB5B-203ENST00000546810 ASXL3Q9C0F0 2248 aa13.86□□□□□ -0.19
RAB5B-203ENST00000546810 PCDH15Q96QU1 1955 aa13.86□□□□□ -0.19
RAB5B-203ENST00000546810 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
RAB5B-203ENST00000546810 A0A087WV48 116 aa13.86□□□□□ -0.19
RAB5B-203ENST00000546810 TCRBV21S2A2A0A5A6 115 aa13.86□□□□□ -0.19
RAB5B-203ENST00000546810 GJB3O75712 270 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms