RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 EGFLAMQ63HQ2 1017 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 TMEM215Q68D42 235 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 MBLAC2Q68D91 279 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 SETD3Q86TU7 594 aaPredicted RBP17.31■□□□□ 0.36
CCDC38-203ENST00000546803 ADIPOR2Q86V24 386 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 MAML2Q8IZL2 1156 aaPredicted RBP17.31■□□□□ 0.36
CCDC38-203ENST00000546803 ALLCQ8N6M5 410 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 SLC35G2Q8TBE7 412 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 TTC17Q96AE7 1141 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 BTBD6Q96KE9 485 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 EPAS1Q99814 870 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 THAP10Q9P2Z0 257 aaPredicted RBP17.31■□□□□ 0.36
CCDC38-203ENST00000546803 PCSK1NQ9UHG2 260 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 HCN2Q9UL51 889 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 SLC8A2Q9UPR5 921 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 FAM72CH0Y354 149 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 CNTN5O94779 1100 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 LRIG2O94898 1065 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 PROSCO94903 275 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 ASLP04424 464 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 RHOQP17081 205 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 POLR2EP19388 210 aaKnown RBP17.3■□□□□ 0.36
CCDC38-203ENST00000546803 HOXA6P31267 233 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 ARHGAP25P42331 645 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 IRAK1P51617 712 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 ZNF135P52742 658 aaPredicted RBP17.3■□□□□ 0.36
CCDC38-203ENST00000546803 PLK1P53350 603 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 PTPN5P54829 565 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 ZNF528Q3MIS6 628 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 PITRM1Q5JRX3 1037 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 C6orf118Q5T5N4 469 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 FAM72AQ5TYM5 149 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 FAM72DQ6L9T8 149 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 CXorf57Q6NSI4 855 aaKnown RBP17.3■□□□□ 0.36
CCDC38-203ENST00000546803 FAM72BQ86X60 149 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 TMEM139Q8IV31 216 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 CHPFQ8IZ52 775 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 CCDC33Q8N5R6 958 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 CAMKK1Q8N5S9 505 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 TXNDC5Q8NBS9 432 aaKnown RBP17.3■□□□□ 0.36
CCDC38-203ENST00000546803 TBC1D31Q96DN5 1066 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 SNRNP25Q9BV90 132 aaKnown RBP17.3■□□□□ 0.36
CCDC38-203ENST00000546803 FAM126AQ9BYI3 521 aaPredicted RBP17.3■□□□□ 0.36
CCDC38-203ENST00000546803 MPP6Q9NZW5 540 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 PLA2G4CQ9UP65 541 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 AP4E1Q9UPM8 1137 aa17.3■□□□□ 0.36
CCDC38-203ENST00000546803 ARIH1Q9Y4X5 557 aaPredicted RBP17.3■□□□□ 0.36
CCDC38-203ENST00000546803 ZDBF2Q9HCK1 2354 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 ANTXRLA6NF34 631 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 DLDP09622 509 aaKnown RBP17.29■□□□□ 0.36
CCDC38-203ENST00000546803 MAN1A1P33908 653 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 CSKP41240 450 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 MRE11P49959 708 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 DGKEP52429 567 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 CSTF1Q05048 431 aaKnown RBP17.29■□□□□ 0.36
CCDC38-203ENST00000546803 SULT2A1Q06520 285 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 SEMA3BQ13214 749 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 CRY1Q16526 586 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 HADHQ16836 314 aaKnown RBP17.29■□□□□ 0.36
CCDC38-203ENST00000546803 PLEKHG6Q3KR16 790 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 FUT11Q495W5 492 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 RWDD4Q6NW29 188 aaKnown RBP17.29■□□□□ 0.36
CCDC38-203ENST00000546803 RAD9BQ6WBX8 426 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 ZNF783Q6ZMS7 281 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 PRSS33Q8NF86 280 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 TEKT4Q8WW24 435 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 PEBP4Q96S96 227 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 GABRG3Q99928 467 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 MAGEB5Q9BZ81 275 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 DHX35Q9H5Z1 703 aaKnown RBP17.29■□□□□ 0.36
CCDC38-203ENST00000546803 OSGEPQ9NPF4 335 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 DONSONQ9NYP3 566 aa17.29■□□□□ 0.36
CCDC38-203ENST00000546803 INTS6Q9UL03 887 aaKnown RBP17.29■□□□□ 0.36
CCDC38-203ENST00000546803 A0A0A6YYK5 440 aaPredicted RBP17.28■□□□□ 0.36
CCDC38-203ENST00000546803 K7ESF4 209 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 SGK1O00141 431 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 ADAM23O75077 832 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 RHOCP08134 193 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 SP9P0CG40 484 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 COL9A1P20849 921 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 EPHB2P29323 1055 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 OR1E1P30953 314 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 HOXC13P31276 330 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 MAPKAPK2P49137 400 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 NRLP54845 237 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 HADHBP55084 474 aaKnown RBP17.28■□□□□ 0.36
CCDC38-203ENST00000546803 KRT83P78385 493 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 TCF15Q12870 199 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 ENPP2Q13822 863 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 CYP4V2Q6ZWL3 525 aaPredicted RBP17.28■□□□□ 0.36
CCDC38-203ENST00000546803 TFAP2DQ7Z6R9 452 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 NLRP14Q86W24 1093 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 PYROXD2Q8N2H3 581 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 KDM1BQ8NB78 822 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 CCDC112Q8NEF3 446 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 ALG14Q96F25 216 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 ACOX2Q99424 681 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 FEM1AQ9BSK4 669 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 CATSPERBQ9H7T0 1116 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 TMEM248Q9NWD8 314 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms