RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 RAD54BQ9Y620 910 aa12.25□□□□□ -0.45
YBX3-217ENST00000546164 ITIH6Q6UXX5 1313 aa12.25□□□□□ -0.45
YBX3-217ENST00000546164 IGLV3-10A0A075B6K4 115 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 DRGXA6NNA5 263 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 DDX3XO00571 662 aaKnown RBP eCLIP12.24□□□□□ -0.45
YBX3-217ENST00000546164 DCLK1O15075 740 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 SYNCRIPO60506 623 aaKnown RBP12.24□□□□□ -0.45
YBX3-217ENST00000546164 CLDN11O75508 207 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 RHOBTB1O94844 696 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 EPN2O95208 641 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 MOCS3O95396 460 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 TPM3P06753 285 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 CSKP41240 450 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 CDH4P55283 916 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 ZBED6P86452 979 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 ATP11AP98196 1134 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 NRG1Q02297 640 aaPredicted RBP12.24□□□□□ -0.45
YBX3-217ENST00000546164 EML5Q05BV3 1969 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 KLHL30Q0D2K2 578 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 CAMK2GQ13555 558 aaPredicted RBP12.24□□□□□ -0.45
YBX3-217ENST00000546164 ARID5BQ14865 1188 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 ELF2Q15723 593 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 PITRM1Q5JRX3 1037 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 SPDYCQ5MJ68 293 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 ARTNQ5T4W7 220 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 HGSNATQ68CP4 663 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 PMS2CLQ68D20 193 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 DNAJC24Q6P3W2 148 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 WDR59Q6PJI9 974 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 PHLDB2Q86SQ0 1253 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 C14orf80Q86SX3 495 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 FAM131BQ86XD5 332 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 CYB5D2Q8WUJ1 264 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 MYO19Q96H55 970 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 PPP1R9BQ96SB3 815 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 HINFPQ9BQA5 517 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 XPO4Q9C0E2 1151 aaKnown RBP12.24□□□□□ -0.45
YBX3-217ENST00000546164 MKRN2Q9H000 416 aaKnown RBP12.24□□□□□ -0.45
YBX3-217ENST00000546164 SIK2Q9H0K1 926 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 FBRSQ9HAH7 460 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 TAS2R14Q9NYV8 317 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 TBC1D30Q9Y2I9 924 aa12.24□□□□□ -0.45
YBX3-217ENST00000546164 BZW2Q9Y6E2 419 aaKnown RBP12.24□□□□□ -0.45
YBX3-217ENST00000546164 MUC22E2RYF6 1773 aaPredicted RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 CBFA2T2O43439 604 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 FOXD2O60548 495 aaPredicted RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 GJB6O95452 261 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 GYPCP04921 128 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 EPHX1P07099 455 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 SRPRAP08240 638 aaKnown RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 GPD1P21695 349 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 BCKDHBP21953 392 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 RRM1P23921 792 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 GGCXP38435 758 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 IRAK1P51617 712 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 ZNF143P52747 638 aaPredicted RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 COPAP53621 1224 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 HDAC4P56524 1084 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 SULT2A1Q06520 285 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 C15orf59Q2T9L4 293 aaPredicted RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 FNDC3BQ53EP0 1204 aaKnown RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 PLEKHA7Q6IQ23 1121 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 LRRC31Q6UY01 552 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 CIR1Q86X95 450 aaPredicted RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 PGBD3Q8N328 593 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 OR2T3Q8NH03 318 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 NTAN1Q96AB6 310 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 ALG14Q96F25 216 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 MRGPRX3Q96LB0 322 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 PARD6AQ9NPB6 346 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 SUN2Q9UH99 717 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 MBD1Q9UIS9 605 aaPredicted RBP12.23□□□□□ -0.45
YBX3-217ENST00000546164 CKAP5Q14008 2032 aa12.23□□□□□ -0.45
YBX3-217ENST00000546164 ABCA7Q8IZY2 2146 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 PLXND1Q9Y4D7 1925 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.22□□□□□ -0.45
YBX3-217ENST00000546164 IGHV1OR15-9A0A0B4J2B8 117 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 E9PAM4 449 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 IGLV3-19P01714 112 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 HLA-EP13747 358 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 HNRNPH3P31942 346 aaKnown RBP12.22□□□□□ -0.45
YBX3-217ENST00000546164 ADRA1BP35368 520 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 ST8SIA6P61647 398 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 RPL7AP62424 266 aaKnown RBP12.22□□□□□ -0.45
YBX3-217ENST00000546164 ECT2LQ008S8 904 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 SCAPQ12770 1279 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 ZNF177Q13360 481 aaPredicted RBP12.22□□□□□ -0.45
YBX3-217ENST00000546164 MAMLD1Q13495 774 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 CSRP2Q16527 193 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 CDO1Q16878 200 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 HNRNPA1L2Q32P51 320 aaKnown RBP12.22□□□□□ -0.45
YBX3-217ENST00000546164 ARL13BQ3SXY8 428 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 ALFQ53S48 1182 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 SH3PXD2AQ5TCZ1 1133 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 MANEALQ5VSG8 457 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 SLC36A4Q6YBV0 504 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 TMPRSS6Q8IU80 811 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms