RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ABCB4P21439 1286 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 TBXAS1P24557 533 aaPredicted RBP17.27■□□□□ 0.36
CPSF7-225ENST00000545934 ITPKBP27987 946 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 HNF1BP35680 557 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 RXRGP48443 463 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 RPL34P49207 117 aaKnown RBP17.27■□□□□ 0.36
CPSF7-225ENST00000545934 RGS7P49802 495 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 ADPRHP54922 357 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 NXPH1P58417 271 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 NNTQ13423 1086 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 CNGA2Q16280 664 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.36
CPSF7-225ENST00000545934 MS4A13Q5J8X5 152 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 PITRM1Q5JRX3 1037 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 C6orf118Q5T5N4 469 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 MMS22LQ6ZRQ5 1243 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 MMAAQ8IVH4 418 aaKnown RBP17.27■□□□□ 0.36
CPSF7-225ENST00000545934 EID2Q8N6I1 236 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 PIP4K2CQ8TBX8 421 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 GANCQ8TET4 914 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 PTPRN2Q92932 1015 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 SLC35C1Q96A29 364 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 DCBLD2Q96PD2 775 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 DDX50Q9BQ39 737 aaKnown RBP17.27■□□□□ 0.36
CPSF7-225ENST00000545934 NRSN2Q9GZP1 204 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 GOLPH3LQ9H4A5 285 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 ERVMER34-1Q9H9K5 563 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 GDF3Q9NR23 364 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 TPX2Q9ULW0 747 aaKnown RBP17.27■□□□□ 0.36
CPSF7-225ENST00000545934 TLR6Q9Y2C9 796 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 ZDHHC9Q9Y397 364 aa17.27■□□□□ 0.36
CPSF7-225ENST00000545934 PTPRQQ9UMZ3 2332 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 A0A1W2PQ27 194 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 A0A1W2PQ64 194 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 EIF4E1BA6NMX2 242 aaKnown RBP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 RNF225M0QZC1 329 aaPredicted RBP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 PIK3R2O00459 728 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 C1QL1O75973 258 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 LUC7L3O95232 432 aaKnown RBP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 JUPP14923 745 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 GOT1P17174 413 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 TARDBPQ13148 414 aaKnown RBP eCLIP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 TCERG1LQ5VWI1 586 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 SND1Q7KZF4 910 aaKnown RBP eCLIP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 CACTIN-AS1Q8N1I8 211 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 CFAP52Q8N1V2 620 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 CARNMT1Q8N4J0 409 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 DQX1Q8TE96 717 aaKnown RBP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 HSFY1Q96LI6 401 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 OMDQ99983 421 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 NUCKS1Q9H1E3 243 aaKnown RBP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 AASDHPPTQ9NRN7 309 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 SLCO3A1Q9UIG8 710 aa17.26■□□□□ 0.35
CPSF7-225ENST00000545934 COL27A1Q8IZC6 1860 aaPredicted RBP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 HELZ2Q9BYK8 2649 aaKnown RBP17.26■□□□□ 0.35
CPSF7-225ENST00000545934 TYW5A2RUC4 315 aaKnown RBP17.25■□□□□ 0.35
CPSF7-225ENST00000545934 ATXN7O15265 892 aaPredicted RBP17.25■□□□□ 0.35
CPSF7-225ENST00000545934 KALRNO60229 2985 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 FBXO21O94952 628 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 ZNF202O95125 648 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 ADH1BP00325 375 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 C5AR1P21730 350 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 DRD3P35462 400 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 PRCPP42785 496 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 KRT85P78386 507 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 ECT2LQ008S8 904 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 BNIP3Q12983 259 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 ILKQ13418 452 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 CDH18Q13634 790 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 DCAF6Q58WW2 860 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 HES3Q5TGS1 186 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 TMEM270Q6UE05 265 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 BEND5Q7L4P6 421 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 SPATS2Q86XZ4 545 aaKnown RBP17.25■□□□□ 0.35
CPSF7-225ENST00000545934 APCDD1Q8J025 514 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 MFSD2AQ8NA29 543 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 LSM14AQ8ND56 463 aaKnown RBP17.25■□□□□ 0.35
CPSF7-225ENST00000545934 SNIP1Q8TAD8 396 aaKnown RBP17.25■□□□□ 0.35
CPSF7-225ENST00000545934 RFFLQ8WZ73 363 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 SERPINB11Q96P15 392 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 ARHGAP20Q9P2F6 1191 aa17.25■□□□□ 0.35
CPSF7-225ENST00000545934 TLR4O00206 839 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 PMM2O15305 246 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 PRB1P04280 392 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 HSP90AA1P07900 732 aaKnown RBP17.24■□□□□ 0.35
CPSF7-225ENST00000545934 PSMD8P48556 350 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 ARRB1P49407 418 aaPredicted RBP17.24■□□□□ 0.35
CPSF7-225ENST00000545934 PMS1P54277 932 aaKnown RBP17.24■□□□□ 0.35
CPSF7-225ENST00000545934 PPP2CBP62714 309 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 PPP2CAP67775 309 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 FKBP3Q00688 224 aaKnown RBP17.24■□□□□ 0.35
CPSF7-225ENST00000545934 LRMPQ12912 555 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 STILQ15468 1287 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 ANKRD40Q6AI12 368 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 STK40Q8N2I9 435 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 OXR1Q8N573 874 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 SERAC1Q96JX3 654 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 NAALADL1Q9UQQ1 740 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms