RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 GID8Q9NWU2 228 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 GMIPQ9P107 970 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 DNPEPQ9ULA0 475 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 IGKV6D-41A0A0C4DH26 115 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 IGF2BP3O00425 579 aaKnown RBP eCLIP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 GRM6O15303 877 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 TLR5O60602 858 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 CYP3A5P20815 502 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 ARL2P36404 184 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 METTL3Q86U44 580 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 PCYOX1LQ8NBM8 494 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 NPLOC4Q8TAT6 608 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MFSD14AQ96MC6 490 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 NR1H4Q96RI1 486 aaPredicted RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 TRIM4Q9C037 500 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 AVENQ9NQS1 362 aaPredicted RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 RGS18Q9NS28 235 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 ATRNL1Q5VV63 1379 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 RAD51BO15315 384 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 ENO3P13929 434 aaPredicted RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 FMO4P31512 558 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 CCNI2Q6ZMN8 369 aaPredicted RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 TDRD5Q8NAT2 981 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MAGEC3Q8TD91 643 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 PIH1D1Q9NWS0 290 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 DUS2Q9NX74 493 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MYH3P11055 1940 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 SYN3O14994 580 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 AMD1P17707 334 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 SMAD3P84022 425 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MPP3Q13368 585 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 GDF6Q6KF10 455 aaPredicted RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 FAM180AQ6UWF9 173 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 NPNTQ6UXI9 565 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MARK2Q7KZI7 788 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 PIGZQ86VD9 579 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 TNS4Q8IZW8 715 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 C10orf53Q8N6V4 93 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 DNAJC19Q96DA6 116 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 HSD17B14Q9BPX1 270 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF556Q9HAH1 456 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 PCDH9Q9HC56 1237 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 NDRG2Q9UN36 371 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 LYPLA2O95372 231 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MRPS5P82675 430 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MED21Q13503 144 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 HYIQ5T013 277 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 CYP20A1Q6UW02 462 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 CHPFQ8IZ52 775 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 ZBTB10Q96DT7 871 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MAGED4Q96JG8 741 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 SERPINB12Q96P63 405 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 C11orf84Q9BUA3 381 aaPredicted RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 RMND5AQ9H871 391 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 HPS4Q9NQG7 708 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 GTF2IRD1Q9UHL9 959 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 NAALADL1Q9UQQ1 740 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 PCDHA3Q9Y5H8 950 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 NUP98P52948 1817 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 EVPLLA8MZ36 301 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 FKBP9O95302 570 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 PTPN2P17706 415 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SULT2A1Q06520 285 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 FKBP9P1Q75LS8 142 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SNX27Q96L92 541 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 KRCC1Q9NPI7 259 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 RPS6KB2Q9UBS0 482 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 NHSL1Q5SYE7 1610 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 MGAT4DA6NG13 374 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SOX11P35716 441 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SERPINH1P50454 418 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF618Q5T7W0 954 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SYTL1Q8IYJ3 562 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SPPL2BQ8TCT7 592 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 PANX3Q96QZ0 392 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 NAT9Q9BTE0 207 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 MLPHQ9BV36 600 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 CAPN6Q9Y6Q1 641 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 RGPD1P0DJD0 1748 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 GNG14A0A1W2PPG7 69 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 TBC1D4O60343 1298 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 NBNO60934 754 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 NFATC1O95644 943 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 KDELR1P24390 212 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 TKTP29401 623 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 CD151P48509 253 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF143P52747 638 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 LBX1P52954 281 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 MAMLD1Q13495 774 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 GRB14Q14449 540 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 HIC1Q14526 733 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SLC29A2Q14542 456 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 CASP10Q92851 521 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 GFM2Q969S9 779 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 RFC2P35250 354 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 PSMD8P48556 350 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 PFKPQ01813 784 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms