RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ADAD1Q96M93 576 aaKnown RBP5.27□□□□□ -1.57
SNHG1-224ENST00000545688 ARHGAP39Q9C0H5 1083 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 TXNRD2Q9NNW7 524 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 SIRT3Q9NTG7 399 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-224ENST00000545688 PCDHA7Q9UN72 937 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 SLC12A4Q9UP95 1085 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 ZBTB1Q9Y2K1 713 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 INSL5Q9Y5Q6 135 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 TCF20Q9UGU0 1960 aaKnown RBP5.27□□□□□ -1.57
SNHG1-224ENST00000545688 RPS10-NUDT3A0A1W2PQS6 291 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 KIF28PB7ZC32 967 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 NEURL1O76050 574 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 GRK5P34947 590 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 PMPCAQ10713 525 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 C10orf76Q5T2E6 689 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 TMEM88Q6PEY1 159 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 RTL10Q7L3V2 364 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 KDELC2Q7Z4H8 507 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 WDR60Q8WVS4 1066 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 IP6K1Q92551 441 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 MUL1Q969V5 352 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 PRPF18Q99633 342 aaKnown RBP5.26□□□□□ -1.57
SNHG1-224ENST00000545688 SF3B5Q9BWJ5 86 aaKnown RBP5.26□□□□□ -1.57
SNHG1-224ENST00000545688 CCDC134Q9H6E4 229 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 FBXO4Q9UKT5 387 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 TNFSF13BQ9Y275 285 aa5.26□□□□□ -1.57
SNHG1-224ENST00000545688 DCAF1Q9Y4B6 1507 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 MSI1O43347 362 aaKnown RBP5.25□□□□□ -1.57
SNHG1-224ENST00000545688 CYP3A4P08684 503 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 ABCB4P21439 1286 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 TNFRSF8P28908 595 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 GALNT3Q14435 633 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 ARL13AQ5H913 290 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-224ENST00000545688 ENTPD8Q5MY95 495 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 WASHC2DQ5SRD0 308 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 IL31Q6EBC2 164 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 C7orf57Q8NEG2 295 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 ZNF419Q96HQ0 510 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-224ENST00000545688 NTPCRQ9BSD7 190 aaKnown RBP5.25□□□□□ -1.57
SNHG1-224ENST00000545688 MECRQ9BV79 373 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 ISCUQ9H1K1 167 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 SLCO5A1Q9H2Y9 848 aa5.25□□□□□ -1.57
SNHG1-224ENST00000545688 CYP3A7-CYP3A51PA0A087WV96 503 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 DNPH1O43598 174 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 ASNA1O43681 348 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 CYP3A7P24462 503 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 RFX2P48378 723 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 NEK3P51956 506 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 PARM1Q6UWI2 310 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 CTU1Q7Z7A3 348 aaKnown RBP5.24□□□□□ -1.57
SNHG1-224ENST00000545688 NRSN1Q8IZ57 195 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 CLEC4CQ8WTT0 213 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 NEUROG1Q92886 237 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 SGCZQ96LD1 299 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 MYD88Q99836 296 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 MAGEH1Q9H213 219 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D14Q9P2M4 693 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 NFU1Q9UMS0 254 aa5.24□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3DA0A087WVF3 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3IA0A087WXS9 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3EA0A087X179 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3KA0A087X1G2 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3BA6NDS4 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3FA6NER0 549 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-224ENST00000545688 AQP12BA6NM10 295 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 KCNJ18B7U540 433 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3LB9A6J9 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 KLKB1P03952 638 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3HP0C7X1 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TGFB3P10600 412 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 MLH1P40692 756 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 RBM6P78332 1123 aaKnown RBP5.23□□□□□ -1.57
SNHG1-224ENST00000545688 RNASELQ05823 741 aaKnown RBP5.23□□□□□ -1.57
SNHG1-224ENST00000545688 Q5PR19 223 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3GQ6DHY5 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3CQ6IPX1 549 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TBC1D3Q8IZP1 549 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-224ENST00000545688 IQCF1Q8N6M8 205 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 DEPTORQ8TB45 409 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 URB1-AS1Q96HZ7 61 aa5.23□□□□□ -1.57
SNHG1-224ENST00000545688 TP63Q9H3D4 680 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-224ENST00000545688 COPG1Q9Y678 874 aaKnown RBP5.23□□□□□ -1.57
SNHG1-224ENST00000545688 GAGE12JA6NER3 117 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 SLC38A8A6NNN8 435 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 MCIDASD6RGH6 385 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 PRSS44E7EML9 344 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 ADPRHP54922 357 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 SF3A3Q12874 501 aaKnown RBP eCLIP5.22□□□□□ -1.576e-19■■■□□ 14.9
SNHG1-224ENST00000545688 PICALMQ13492 652 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 BTBD16Q32M84 506 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 ALG10Q5BKT4 473 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 ALG10BQ5I7T1 473 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 ZNF569Q5MCW4 686 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 CCDC181Q5TID7 509 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 ZNF324BQ6AW86 544 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-224ENST00000545688 ERAP2Q6P179 960 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 PDXDC1Q6P996 788 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 TRILQ7L0X0 811 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-224ENST00000545688 SORBS1Q9BX66 1292 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms