RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 CACNA1BQ00975 2339 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 PLXNA2O75051 1894 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 SPAARA0A1B0GVQ0 90 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 TTC34A8MYJ7 566 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 SEMA4FO95754 770 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 CDH5P33151 784 aaPredicted RBP21.81■■□□□ 1.08
SCARB1-210ENST00000545493 KRT9P35527 623 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 STK19P49842 368 aaPredicted RBP21.81■■□□□ 1.08
SCARB1-210ENST00000545493 SLC6A3Q01959 620 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 ARID5BQ14865 1188 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 TCP11X2Q5H9J9 407 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 TTC39BQ5VTQ0 682 aaPredicted RBP21.81■■□□□ 1.08
SCARB1-210ENST00000545493 CXorf57Q6NSI4 855 aaKnown RBP21.81■■□□□ 1.08
SCARB1-210ENST00000545493 CCDC117Q8IWD4 279 aaPredicted RBP21.81■■□□□ 1.08
SCARB1-210ENST00000545493 CCAR2Q8N163 923 aaKnown RBP21.81■■□□□ 1.08
SCARB1-210ENST00000545493 SNX19Q92543 992 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 IGSF8Q969P0 613 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 BTBD1Q9H0C5 482 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 PABPC3Q9H361 631 aaKnown RBP21.81■■□□□ 1.08
SCARB1-210ENST00000545493 TAB2Q9NYJ8 693 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 CEP83Q9Y592 693 aa21.81■■□□□ 1.08
SCARB1-210ENST00000545493 AKAP13Q12802 2813 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 TP53BP1Q12888 1972 aaPredicted RBP21.8■■□□□ 1.08
SCARB1-210ENST00000545493 A0A1B0GVM2 712 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 FAM170AA1A519 330 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 TCAF2A6NFQ2 919 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 PES1O00541 588 aaKnown RBP21.8■■□□□ 1.08
SCARB1-210ENST00000545493 BCAT2O15382 392 aaPredicted RBP21.8■■□□□ 1.08
SCARB1-210ENST00000545493 SRPRAP08240 638 aaKnown RBP21.8■■□□□ 1.08
SCARB1-210ENST00000545493 SLC2A3P11169 496 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 CYP11B1P15538 503 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 PDGFRAP16234 1089 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 SPINK2P20155 84 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 ABCB4P21439 1286 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 EEF1GP26641 437 aaKnown RBP21.8■■□□□ 1.08
SCARB1-210ENST00000545493 FAM193AP78312 1265 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 NME3Q13232 169 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 C9orf64Q5T6V5 341 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 FBXL22Q6P050 247 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 ZDHHC5Q9C0B5 715 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 SYNCQ9H7C4 482 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 HS3ST4Q9Y661 456 aa21.8■■□□□ 1.08
SCARB1-210ENST00000545493 TMEM131Q92545 1883 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 F8VZ95 297 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 MOCS3O95396 460 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 UCHL3P15374 230 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 TFE3P19532 575 aaPredicted RBP21.79■■□□□ 1.08
SCARB1-210ENST00000545493 MZF1P28698 734 aaPredicted RBP21.79■■□□□ 1.08
SCARB1-210ENST00000545493 NOS2P35228 1153 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 ANP32AP39687 249 aaKnown RBP21.79■■□□□ 1.08
SCARB1-210ENST00000545493 ECT2LQ008S8 904 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 ST3GAL2Q16842 350 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 RABGAP1LQ5R372 815 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 TAF3Q5VWG9 929 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 RBM43Q6ZSC3 357 aaKnown RBP21.79■■□□□ 1.08
SCARB1-210ENST00000545493 NOP9Q86U38 636 aaKnown RBP21.79■■□□□ 1.08
SCARB1-210ENST00000545493 GPT2Q8TD30 523 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 RPL10LQ96L21 214 aaKnown RBP21.79■■□□□ 1.08
SCARB1-210ENST00000545493 ORAI3Q9BRQ5 295 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 IL21RQ9HBE5 538 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 SGK2Q9HBY8 427 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 ANLNQ9NQW6 1124 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 PIGVQ9NUD9 493 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 SLC12A6Q9UHW9 1150 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 SLCO3A1Q9UIG8 710 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 VANGL2Q9ULK5 521 aa21.79■■□□□ 1.08
SCARB1-210ENST00000545493 CFAP47Q6ZTR5 3102 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 EDDM13A0A1B0GTR0 161 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 PCNX2A6NKB5 2137 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 I6L893 689 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-210ENST00000545493 M0QYT0 321 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 MID1O15344 667 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 BPIFB4P59827 614 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 AUHQ13825 339 aaKnown RBP21.78■■□□□ 1.08
SCARB1-210ENST00000545493 CT47A1Q5JQC4 288 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-210ENST00000545493 CDKAL1Q5VV42 579 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 USP30Q70CQ3 517 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 ZDHHC17Q8IUH5 632 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 TMEM35BQ8NCS4 154 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 OR52K2Q8NGK3 314 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 RNF34Q969K3 372 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 BIRC7Q96CA5 298 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 CAMK1GQ96NX5 476 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 RPRD1AQ96P16 312 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-210ENST00000545493 NPY6RQ99463 290 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 GANQ9H2C0 597 aa21.78■■□□□ 1.08
SCARB1-210ENST00000545493 A0A1B0GVT2 93 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 A0A1W2PP55 124 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 SH3BP5O60239 455 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 PAGE1O75459 146 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 MATKP42679 507 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 GABRB2P47870 512 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 KLK7P49862 253 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 SULT1E1P49888 294 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 SIM1P81133 766 aaPredicted RBP21.77■■□□□ 1.08
SCARB1-210ENST00000545493 SLC14A1Q13336 389 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 SLC12A1Q13621 1099 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 CST6Q15828 149 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 RNF219Q5W0B1 726 aaPredicted RBP21.77■■□□□ 1.08
SCARB1-210ENST00000545493 LAYNQ6UX15 382 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms