RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 NEDD8-MDP1E9PL57 170 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 M0QYV0 167 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 TULP2O00295 520 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 RPP40O75818 363 aaKnown RBP8.02□□□□□ -1.13
SNHG1-223ENST00000545440 RETP07949 1114 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 NID1P14543 1247 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 TNFRSF4P43489 277 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 KIR2DL1P43626 348 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-223ENST00000545440 SLC6A11P48066 632 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 DGKEP52429 567 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 MESP2Q0VG99 397 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 EFEMP1Q12805 493 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 CNGA2Q16280 664 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 ANO4Q32M45 955 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 DPCR1Q3MIW9 517 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 C2orf27AQ580R0 203 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 GRAMD4Q6IC98 578 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 RRAGAQ7L523 313 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-223ENST00000545440 RASSF3Q86WH2 238 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 TMEM25Q86YD3 366 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 MIB1Q86YT6 1006 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 FAM114A1Q8IWE2 563 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 ZSCAN1Q8NBB4 408 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 PHC3Q8NDX5 983 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 TSTD1Q8NFU3 115 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 SLC35F5Q8WV83 523 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 IRGQQ8WZA9 623 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 XPO6Q96QU8 1125 aaKnown RBP8.02□□□□□ -1.13
SNHG1-223ENST00000545440 MED15Q96RN5 788 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 ZSWIM1Q9BR11 485 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 BBS2Q9BXC9 721 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 DCLK3Q9C098 648 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 THAP9Q9H5L6 903 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 RAD18Q9NS91 495 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 MARCH2Q9P0N8 246 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 WDR35Q9P2L0 1181 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 DEC1Q9P2X7 70 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 RASAL2Q9UJF2 1139 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 NUDT5Q9UKK9 219 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 HBS1LQ9Y450 684 aaKnown RBP8.02□□□□□ -1.13
SNHG1-223ENST00000545440 DNAH14Q0VDD8 3507 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 CHD5Q8TDI0 1954 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 YJEFN3A6XGL0 299 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 E7ENQ6 273 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 RNF225M0QZC1 329 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 FOXD2O60548 495 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 FBXO21O94952 628 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 LATS1O95835 1130 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 PENKP01210 267 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 KLKB1P03952 638 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 GSTP1P09211 210 aaKnown RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 TYRP14679 529 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CORO1AP31146 461 aaKnown RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CHKAP35790 457 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 RPL34P49207 117 aaKnown RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 DAOAP59103 153 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 ZNF445P59923 1031 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 SRSF5Q13243 272 aaKnown RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CAMK2GQ13555 558 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CRY1Q16526 586 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 LPAL2Q16609 132 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 MAN2A1Q16706 1144 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CT47A1Q5JQC4 288 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 EOGTQ5NDL2 527 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 C10orf76Q5T2E6 689 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 BSPRYQ5W0U4 402 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 MSANTD2Q6P1R3 559 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 GBP6Q6ZN66 633 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CEP68Q76N32 757 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CACNA2D4Q7Z3S7 1137 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 TRMT11Q7Z4G4 463 aaKnown RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 C11orf74Q86VG3 221 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 IRF2BP1Q8IU81 584 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 SFTPA1Q8IWL2 248 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 FAM217AQ8IXS0 508 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 KIAA2013Q8IYS2 634 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CPXM2Q8N436 756 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 DCLK2Q8N568 766 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 ALLCQ8N6M5 410 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 IL17RCQ8NAC3 791 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 UBA3Q8TBC4 463 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 RNF139Q8WU17 664 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 SCARF2Q96GP6 870 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 LOXL4Q96JB6 756 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 ZC3H10Q96K80 434 aaKnown RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 HSFY1Q96LI6 401 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 GBP4Q96PP9 640 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 ABCC13Q9NSE7 274 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 DNAJC17Q9NVM6 304 aaKnown RBP8.01□□□□□ -1.13
SNHG1-223ENST00000545440 APEX2Q9UBZ4 518 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 WDR87Q6ZQQ6 2873 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 PCDH15Q96QU1 1955 aa8.01□□□□□ -1.13
SNHG1-223ENST00000545440 CNOT1A5YKK6 2376 aaKnown RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 SLC12A8A0AV02 714 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 TBC1D3BA6NDS4 549 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 SGK1O00141 431 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 SART1O43290 800 aaKnown RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 MED7O43513 233 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 WIPF1O43516 503 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms