RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 TRIM61Q5EBN2 209 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 IL31Q6EBC2 164 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 MMS22LQ6ZRQ5 1243 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 SLC41A1Q8IVJ1 513 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 CCAR2Q8N163 923 aaKnown RBP17.47■□□□□ 0.39
HOXD8-204ENST00000544999 DEFB119Q8N690 84 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 FOXJ1Q92949 421 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 TOE1Q96GM8 510 aaKnown RBP17.47■□□□□ 0.39
HOXD8-204ENST00000544999 ZNF419Q96HQ0 510 aaPredicted RBP17.47■□□□□ 0.39
HOXD8-204ENST00000544999 MRGPRX3Q96LB0 322 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 RPRD1AQ96P16 312 aaPredicted RBP17.47■□□□□ 0.39
HOXD8-204ENST00000544999 TBCBQ99426 244 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 TKTL2Q9H0I9 626 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 PRSS16Q9NQE7 514 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 TMEM74BQ9NUR3 256 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 ERVW-1Q9UQF0 538 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 SSUH2Q9Y2M2 353 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 PAXBP1Q9Y5B6 917 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 ATXN2Q99700 1313 aaKnown RBP17.47■□□□□ 0.39
HOXD8-204ENST00000544999 FAM170AA1A519 330 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 PAGE1O75459 146 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 ADCY5O95622 1261 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 MMP8P22894 467 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 FLT3P36888 993 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 IRX4P78413 519 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 C5orf22Q49AR2 442 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 ACBD5Q5T8D3 534 aaPredicted RBP17.46■□□□□ 0.39
HOXD8-204ENST00000544999 SLC23A3Q6PIS1 610 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 RABEPKQ7Z6M1 372 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 CIR1Q86X95 450 aaPredicted RBP17.46■□□□□ 0.39
HOXD8-204ENST00000544999 APCDD1Q8J025 514 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 CEP76Q8TAP6 659 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 IGSF8Q969P0 613 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 HSPA12BQ96MM6 686 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 FUCA2Q9BTY2 467 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 NUP58Q9BVL2 599 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 NUSAP1Q9BXS6 441 aaKnown RBP17.46■□□□□ 0.39
HOXD8-204ENST00000544999 VANGL2Q9ULK5 521 aa17.46■□□□□ 0.39
HOXD8-204ENST00000544999 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.38
HOXD8-204ENST00000544999 UNGP13051 313 aaPredicted RBP17.45■□□□□ 0.38
HOXD8-204ENST00000544999 PDGFRAP16234 1089 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 ZNF165P49910 485 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 PLK1P53350 603 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 GSCP56915 257 aaPredicted RBP17.45■□□□□ 0.38
HOXD8-204ENST00000544999 ECT2LQ008S8 904 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 CENPCQ03188 943 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 ZBTB16Q05516 673 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 ARID5BQ14865 1188 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 DUOXA1Q1HG43 343 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 KLHL40Q2TBA0 621 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 HNRNPA1L2Q32P51 320 aaKnown RBP17.45■□□□□ 0.38
HOXD8-204ENST00000544999 SYCP2LQ5T4T6 812 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 CXorf57Q6NSI4 855 aaKnown RBP17.45■□□□□ 0.38
HOXD8-204ENST00000544999 TRNP1Q6NT89 227 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 BNIPLQ7Z465 357 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 CACUL1Q86Y37 369 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 CADM4Q8NFZ8 388 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 PPP1R9BQ96SB3 815 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 PCDHB18PQ96TA0 734 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 C11orf70Q9BRQ4 267 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 SIK2Q9H0K1 926 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 ANLNQ9NQW6 1124 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 METTL5Q9NRN9 209 aaKnown RBP17.45■□□□□ 0.38
HOXD8-204ENST00000544999 FRYLO94915 3013 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 DCHS1Q96JQ0 3298 aa17.45■□□□□ 0.38
HOXD8-204ENST00000544999 PI4KAP42356 2102 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 MED19A0JLT2 244 aaPredicted RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 TM4SF5O14894 197 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 TEX33O43247 280 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 CLDN11O75508 207 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 RDXP35241 583 aaKnown RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 GGCXP38435 758 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 CTSOP43234 321 aaPredicted RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 CDH4P55283 916 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 RPS14P62263 151 aaKnown RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 SULT2A1Q06520 285 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 ZNF177Q13360 481 aaPredicted RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 FILIP1LQ4L180 1135 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 WDR45BQ5MNZ6 344 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 RNF219Q5W0B1 726 aaPredicted RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 ZNF776Q68DI1 518 aaPredicted RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 C14orf80Q86SX3 495 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 SLC30A5Q8TAD4 765 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 CFAP57Q96MR6 1250 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 GPR174Q9BXC1 333 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 TMEM9BQ9NQ34 198 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 RTN4Q9NQC3 1192 aaKnown RBP17.44■□□□□ 0.38
HOXD8-204ENST00000544999 DMXL1Q9Y485 3027 aa17.44■□□□□ 0.38
HOXD8-204ENST00000544999 EDDM13A0A1B0GTR0 161 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 TARSL2A2RTX5 802 aaKnown RBP17.43■□□□□ 0.38
HOXD8-204ENST00000544999 I6L893 689 aaPredicted RBP17.43■□□□□ 0.38
HOXD8-204ENST00000544999 SIN3BO75182 1162 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 ENDOD1O94919 500 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 DNTTP04053 509 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 CCDC172P0C7W6 258 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 FERP16591 822 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 MZF1P28698 734 aaPredicted RBP17.43■□□□□ 0.38
HOXD8-204ENST00000544999 NSFP46459 744 aaKnown RBP17.43■□□□□ 0.38
HOXD8-204ENST00000544999 IRAK1P51617 712 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms