RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CXADRP78310 365 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 NUCB2P80303 420 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 ADIGQ0VDE8 80 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 SFSWAPQ12872 951 aaKnown RBP13.31□□□□□ -0.28
USP28-212ENST00000544750 PKDCCQ504Y2 493 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 KRT39Q6A163 491 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 NADSYN1Q6IA69 706 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 MMAAQ8IVH4 418 aaKnown RBP13.31□□□□□ -0.28
USP28-212ENST00000544750 MFN1Q8IWA4 741 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 OXR1Q8N573 874 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 ZNF557Q8N988 423 aaPredicted RBP13.31□□□□□ -0.28
USP28-212ENST00000544750 GANCQ8TET4 914 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 RNF139Q8WU17 664 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 KCTD13Q8WZ19 329 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 TATDN2Q93075 761 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 MYEOVQ96EZ4 313 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 SERAC1Q96JX3 654 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 PRICKLE1Q96MT3 831 aaPredicted RBP13.31□□□□□ -0.28
USP28-212ENST00000544750 SCAND2PQ9GZW5 306 aaPredicted RBP13.31□□□□□ -0.28
USP28-212ENST00000544750 GOLPH3LQ9H4A5 285 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 TSPAN16Q9UKR8 245 aa13.31□□□□□ -0.28
USP28-212ENST00000544750 TPX2Q9ULW0 747 aaKnown RBP13.31□□□□□ -0.28
USP28-212ENST00000544750 TTC34A8MYJ7 566 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 ACSL4O60488 711 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 RNASEH1O60930 286 aaKnown RBP13.3□□□□□ -0.28
USP28-212ENST00000544750 GOT1P17174 413 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 NR2F2P24468 414 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 GTF2H1P32780 548 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 DRD3P35462 400 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 SLC8A3P57103 927 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 ST8SIA6P61647 398 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 BST2Q10589 180 aaKnown RBP13.3□□□□□ -0.28
USP28-212ENST00000544750 KCNH2Q12809 1159 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 GOLGA7BQ2TAP0 167 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 FSCBQ5H9T9 825 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 NAPEPLDQ6IQ20 393 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 SND1Q7KZF4 910 aaKnown RBP eCLIP13.3□□□□□ -0.28
USP28-212ENST00000544750 FAM186BQ8IYM0 893 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 MFSD2AQ8NA29 543 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 CCDC150Q8NCX0 1101 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 PTPRN2Q92932 1015 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 HIC2Q96JB3 615 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 OMDQ99983 421 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 SEMA4CQ9C0C4 833 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 MMRN2Q9H8L6 949 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 LRRC4Q9HBW1 653 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 CNGB3Q9NQW8 809 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 ERVW-1Q9UQF0 538 aa13.3□□□□□ -0.28
USP28-212ENST00000544750 EDDM13A0A1B0GTR0 161 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 A0A1W2PQ27 194 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 A0A1W2PQ64 194 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 TRIM38O00635 465 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 MT-CO3P00414 261 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 SRPRAP08240 638 aaKnown RBP13.29□□□□□ -0.28
USP28-212ENST00000544750 KRT13P13646 458 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 C5AR1P21730 350 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 CTSOP43234 321 aaPredicted RBP13.29□□□□□ -0.28
USP28-212ENST00000544750 NDUFA8P51970 172 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 RPS24P62847 133 aaKnown RBP13.29□□□□□ -0.28
USP28-212ENST00000544750 PITRM1Q5JRX3 1037 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 CDCP2Q5VXM1 449 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 NUGGCQ68CJ6 796 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 MMS22LQ6ZRQ5 1243 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 IQCHQ86VS3 1027 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 UNC45BQ8IWX7 931 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 CEP57L1Q8IYX8 460 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 HJURPQ8NCD3 748 aaPredicted RBP13.29□□□□□ -0.28
USP28-212ENST00000544750 ZNF248Q8NDW4 579 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 FBXL13Q8NEE6 735 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 OR14C36Q8NHC7 312 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 SNRNP27Q8WVK2 155 aaKnown RBP13.29□□□□□ -0.28
USP28-212ENST00000544750 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
USP28-212ENST00000544750 RAB20Q9NX57 234 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 STIM2Q9P246 746 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 SLCO3A1Q9UIG8 710 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 PCDHB1Q9Y5F3 818 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 SPTA1P02549 2419 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 TRPM6Q9BX84 2022 aa13.29□□□□□ -0.28
USP28-212ENST00000544750 HECTD1Q9ULT8 2610 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 RP1P56715 2156 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 PIEZO2Q9H5I5 2752 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 O00370 1275 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 SIGLEC6O43699 453 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 DXOO77932 396 aaKnown RBP13.28□□□□□ -0.28
USP28-212ENST00000544750 ADH1BP00325 375 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
USP28-212ENST00000544750 PSMD8P48556 350 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 SLC11A2P49281 568 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 E2F1Q01094 437 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 RHDQ02161 417 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 ZCWPW2Q504Y3 356 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 SGO2Q562F6 1265 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 SLC45A4Q5BKX6 768 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 KDM7AQ6ZMT4 941 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 STK40Q8N2I9 435 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
USP28-212ENST00000544750 UBR7Q8N806 425 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms