RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ABCB8Q9NUT2 735 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 USP36Q9P275 1121 aaKnown RBP16.81■□□□□ 0.28
DDX55-212ENST00000544738 APEX2Q9UBZ4 518 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 GGA2Q9UJY4 613 aa16.81■□□□□ 0.28
DDX55-212ENST00000544738 PYCARD-AS1I3L0S3 204 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 FYNP06241 537 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 ATP5BP06576 529 aaKnown RBP16.8■□□□□ 0.28
DDX55-212ENST00000544738 PABPC1P11940 636 aaKnown RBP16.8■□□□□ 0.28
DDX55-212ENST00000544738 PRKCSHP14314 528 aaPredicted RBP16.8■□□□□ 0.28
DDX55-212ENST00000544738 SLC9A1P19634 815 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 USP8P40818 1118 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 TPMTP51580 245 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 YWHAZP63104 245 aaKnown RBP16.8■□□□□ 0.28
DDX55-212ENST00000544738 DENND1BQ6P3S1 775 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 RFWD3Q6PCD5 774 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 CHST9Q7L1S5 443 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 IRF2BP1Q8IU81 584 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 CCDC117Q8IWD4 279 aaPredicted RBP16.8■□□□□ 0.28
DDX55-212ENST00000544738 HJURPQ8NCD3 748 aaPredicted RBP16.8■□□□□ 0.28
DDX55-212ENST00000544738 DQX1Q8TE96 717 aaKnown RBP16.8■□□□□ 0.28
DDX55-212ENST00000544738 SORCS1Q8WY21 1168 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 MKRN2Q9H000 416 aaKnown RBP16.8■□□□□ 0.28
DDX55-212ENST00000544738 CLSTN2Q9H4D0 955 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 THAP9Q9H5L6 903 aa16.8■□□□□ 0.28
DDX55-212ENST00000544738 TEX51A0A1B0GUA7 166 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 CAPN8A6NHC0 703 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 ARHGAP6O43182 974 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 TBL1XO60907 577 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 DLDP09622 509 aaKnown RBP16.79■□□□□ 0.28
DDX55-212ENST00000544738 ACADMP11310 421 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 ERCC5P28715 1186 aaPredicted RBP16.79■□□□□ 0.28
DDX55-212ENST00000544738 AFF3P51826 1226 aaKnown RBP16.79■□□□□ 0.28
DDX55-212ENST00000544738 PTK2Q05397 1052 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 ARHGAP44Q17R89 818 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 FNDC3BQ53EP0 1204 aaKnown RBP16.79■□□□□ 0.28
DDX55-212ENST00000544738 TAF1BQ53T94 588 aaPredicted RBP16.79■□□□□ 0.28
DDX55-212ENST00000544738 FAM133BQ5BKY9 247 aaKnown RBP16.79■□□□□ 0.28
DDX55-212ENST00000544738 ADIPOR2Q86V24 386 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 FAM124AQ86V42 546 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 CACUL1Q86Y37 369 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 C1orf216Q8TAB5 229 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 SHC3Q92529 594 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 BAP1Q92560 729 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 SLC39A13Q96H72 371 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 FCRL2Q96LA5 508 aaPredicted RBP16.79■□□□□ 0.28
DDX55-212ENST00000544738 CLMPQ9H6B4 373 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 FBRSQ9HAH7 460 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 POPDC2Q9HBU9 364 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 FTSJ1Q9UET6 329 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 DACH1Q9UI36 760 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 NAALADL1Q9UQQ1 740 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 ANKRD6Q9Y2G4 727 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 SLCO1B1Q9Y6L6 691 aa16.79■□□□□ 0.28
DDX55-212ENST00000544738 GOLGA6L7A0A1B0GV03 622 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 BECN2A8MW95 431 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 E5RJQ4 531 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 PAPSS1O43252 624 aaPredicted RBP16.78■□□□□ 0.28
DDX55-212ENST00000544738 IGLV3-19P01714 112 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 APOEP02649 317 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 POLR2EP19388 210 aaKnown RBP16.78■□□□□ 0.28
DDX55-212ENST00000544738 PRKCHP24723 683 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 PON1P27169 355 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 SLC6A4P31645 630 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 HNF1BP35680 557 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 SNX16P57768 344 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 CXADRP78310 365 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 IL9RQ01113 521 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 CAMK2GQ13555 558 aaPredicted RBP16.78■□□□□ 0.28
DDX55-212ENST00000544738 TEAD4Q15561 434 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 MAN2A1Q16706 1144 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 SYPL2Q5VXT5 272 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 MBLAC2Q68D91 279 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 GJB7Q6PEY0 223 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 PCSK4Q6UW60 755 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 MFN1Q8IWA4 741 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 OR2T3Q8NH03 318 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 FIBINQ8TAL6 211 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 TMEM245Q9H330 911 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 CYTH4Q9UIA0 394 aa16.78■□□□□ 0.28
DDX55-212ENST00000544738 GLI1P08151 1106 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 SGSHP51688 502 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 COPAP53621 1224 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 KCNC4Q03721 635 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 CCDC173Q0VFZ6 552 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 TARDBPQ13148 414 aaKnown RBP eCLIP16.77■□□□□ 0.28
DDX55-212ENST00000544738 PDCLQ13371 301 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 NADSYN1Q6IA69 706 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 BTN2A3PQ96KV6 586 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 NOX5Q96PH1 765 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 LHX5Q9H2C1 402 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 NDST4Q9H3R1 872 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 ACP6Q9NPH0 428 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 STIM2Q9P246 746 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 SUN2Q9UH99 717 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 SLC12A6Q9UHW9 1150 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 PCDHGC3Q9UN70 934 aa16.77■□□□□ 0.28
DDX55-212ENST00000544738 H0Y8X5 98 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 TRUB2O95900 331 aaKnown RBP16.76■□□□□ 0.27
DDX55-212ENST00000544738 ASLP04424 464 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms