RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 CCDC105Q8IYK2 499 aa16.41■□□□□ 0.22
XRCC1-202ENST00000543982 AZIN2Q96A70 460 aa16.41■□□□□ 0.22
XRCC1-202ENST00000543982 RUNDC3BQ96NL0 473 aa16.41■□□□□ 0.22
XRCC1-202ENST00000543982 RPRD1AQ96P16 312 aaPredicted RBP16.41■□□□□ 0.22
XRCC1-202ENST00000543982 OLFM3Q96PB7 478 aa16.41■□□□□ 0.22
XRCC1-202ENST00000543982 ADAM7Q9H2U9 754 aa16.41■□□□□ 0.22
XRCC1-202ENST00000543982 USP29Q9HBJ7 922 aa16.41■□□□□ 0.22
XRCC1-202ENST00000543982 CLDND1Q9NY35 253 aa16.41■□□□□ 0.22
XRCC1-202ENST00000543982 STOML2Q9UJZ1 356 aa16.41■□□□□ 0.22
XRCC1-202ENST00000543982 ZNF197O14709 1029 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 SEC31AO94979 1220 aaKnown RBP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 RBP3P10745 1247 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 FSHRP23945 695 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 AVPR1AP37288 418 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 VIPR2P41587 438 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 FNTAP49354 379 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 C5orf22Q49AR2 442 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 ARHGAP15Q53QZ3 475 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 DRICH1Q6PGQ1 229 aaPredicted RBP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 DDX42Q86XP3 938 aaKnown RBP eCLIP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 JAMLQ86YT9 394 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 ZSCAN18Q8TBC5 510 aaPredicted RBP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 FGF13Q92913 245 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 LINC00597Q9H2U6 94 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 HOMER3Q9NSC5 361 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 TDP1Q9NUW8 608 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 PPARGC1AQ9UBK2 798 aaKnown RBP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 ZFP37Q9Y6Q3 630 aaPredicted RBP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 DENND4CQ5VZ89 1909 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 FAM187AA6NFU0 413 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 BHMG1C9JSJ3 638 aaPredicted RBP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 MYBL2P10244 700 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 VAV1P15498 845 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 DDX6P26196 483 aaKnown RBP eCLIP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 COL19A1Q14993 1142 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 FAM78AQ5JUQ0 283 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 ELMSAN1Q6PJG2 1045 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 RTL3Q8N8U3 475 aaKnown RBP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 ATL2Q8NHH9 583 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 BHMTQ93088 406 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 MSLNLQ96KJ4 702 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 ZYG11BQ9C0D3 744 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 SLC39A8Q9C0K1 460 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 ZNF148Q9UQR1 794 aa16.4■□□□□ 0.22
XRCC1-202ENST00000543982 UTP11Q9Y3A2 253 aaKnown RBP16.4■□□□□ 0.22
XRCC1-202ENST00000543982 TMEM265A0A087WTH1 108 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 RBL1P28749 1068 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 AFMIDQ63HM1 303 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 GET4Q7L5D6 327 aaPredicted RBP16.39■□□□□ 0.21
XRCC1-202ENST00000543982 EIF1ADQ8N9N8 165 aaKnown RBP16.39■□□□□ 0.21
XRCC1-202ENST00000543982 FAM71DQ8N9W8 422 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 TTC13Q8NBP0 860 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 CCDC114Q96M63 670 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 TRIM31Q9BZY9 425 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 TMEM51Q9NW97 253 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 CLEC4EQ9ULY5 219 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 DRG1Q9Y295 367 aaKnown RBP16.39■□□□□ 0.21
XRCC1-202ENST00000543982 C2orf16Q68DN1 1984 aa16.39■□□□□ 0.21
XRCC1-202ENST00000543982 WASH4PA8MWX3 477 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 F5H5T6 163 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 H7C0C1 242 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 ATP8B1O43520 1251 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 ZFXP17010 805 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-202ENST00000543982 RHOQP17081 205 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 PFKLP17858 780 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 ATP5OP48047 213 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 ZNF77Q15935 545 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 DARS2Q6PI48 645 aaKnown RBP16.38■□□□□ 0.21
XRCC1-202ENST00000543982 LRRC31Q6UY01 552 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 FAM217AQ8IXS0 508 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 ALLCQ8N6M5 410 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 SEC14L1Q92503 715 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 MYADMQ96S97 322 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 RAB17Q9H0T7 212 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 TMEM248Q9NWD8 314 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 CLUHO75153 1309 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 ITGAVP06756 1048 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 CARSP49589 748 aaKnown RBP16.38■□□□□ 0.21
XRCC1-202ENST00000543982 ZNF135P52742 658 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-202ENST00000543982 WFDC5Q8TCV5 224 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 CASKIN2Q8WXE0 1202 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 SLCO2A1Q92959 643 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 PLK2Q9NYY3 685 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 SH3BP1Q9Y3L3 701 aa16.38■□□□□ 0.21
XRCC1-202ENST00000543982 BRWD1Q9NSI6 2320 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 MCF2LO15068 1137 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 HOXB8P17481 243 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-202ENST00000543982 IVDP26440 423 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 NR2C2P49116 596 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 VPS41P49754 854 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 CUL1Q13616 776 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 CCDC85BQ15834 202 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-202ENST00000543982 FSCBQ5H9T9 825 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 PRPF38BQ5VTL8 546 aaKnown RBP16.37■□□□□ 0.21
XRCC1-202ENST00000543982 MYLIPQ8WY64 445 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 IFT81Q8WYA0 676 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.37■□□□□ 0.21
XRCC1-202ENST00000543982 ZNF419Q96HQ0 510 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-202ENST00000543982 ASB16Q96NS5 453 aa16.37■□□□□ 0.21
XRCC1-202ENST00000543982 ERP44Q9BS26 406 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms