RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 GIT1Q9Y2X7 761 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 CDY1Q9Y6F8 540 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 CNOT3O75175 753 aaKnown RBP12.96□□□□□ -0.34
SMG8-202ENST00000543872 S100A1P23297 94 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 TRPC1P48995 793 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 ORC1Q13415 861 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 EPGNQ6UW88 154 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 CES3Q6UWW8 571 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 LYSMD3Q7Z3D4 306 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 CARM1Q86X55 608 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 IL31RAQ8NI17 732 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 FBXL18Q96ME1 805 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.96□□□□□ -0.34
SMG8-202ENST00000543872 TXNDC16Q9P2K2 825 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.34
SMG8-202ENST00000543872 WDR27A2RRH5 827 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 CFAP99D6REC4 459 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 H3BMQ9 156 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 TKTP29401 623 aaKnown RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 TUFMP49411 452 aaKnown RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 SESN2P58004 480 aaPredicted RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 PTK2BQ14289 1009 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 RAB6CQ53S08 254 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 GALNT18Q6P9A2 607 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 LAYNQ6UX15 382 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 NAPRTQ6XQN6 538 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 CERS5Q8N5B7 392 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 WDTC1Q8N5D0 677 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 STARD8Q92502 1023 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 HPS1Q92902 700 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 COG8Q96MW5 612 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 RIT2Q99578 217 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 KLHL25Q9H0H3 589 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 RAB6CQ9H0N0 254 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 RPF2Q9H7B2 306 aaKnown RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 MKS1Q9NXB0 559 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 RBAKQ9NYW8 714 aaPredicted RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 RABL2AQ9UBK7 228 aaPredicted RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 PSAT1Q9Y617 370 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 HTRA2O43464 458 aaPredicted RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 TPST1O60507 370 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 TIPRLO75663 272 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 CHRNGP07510 517 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 MX2P20592 715 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 MPSTP25325 297 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 MAP4P27816 1152 aaKnown RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 RPS6P62753 249 aaKnown RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 NSUN2Q08J23 767 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMG8-202ENST00000543872 RALGDSQ12967 914 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 PMS2P3Q13401 168 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 TRPC3Q13507 836 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 LSM12Q3MHD2 195 aaKnown RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 ZNF280DQ6N043 979 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 NIPAL1Q6NVV3 410 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 PEX5LQ8IYB4 626 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 SPATA17Q96L03 361 aa12.95□□□□□ -0.34
SMG8-202ENST00000543872 EBNA1BP2Q99848 306 aaKnown RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 MYO18AQ92614 2054 aaKnown RBP12.95□□□□□ -0.34
SMG8-202ENST00000543872 FAM159BA6NKW6 160 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 A8MU76 341 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 VAPBO95292 243 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 DEPDC1Q5TB30 811 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 RWDD4Q6NW29 188 aaKnown RBP12.94□□□□□ -0.34
SMG8-202ENST00000543872 HERC6Q8IVU3 1022 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 SIX5Q8N196 739 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 SIX6OS1Q8N1H7 587 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 TFAP2BQ92481 460 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 DLG3Q92796 817 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 TAMM41Q96BW9 452 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 ZNF597Q96LX8 424 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 IMPG2Q9BZV3 1241 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 EFCAB1Q9HAE3 211 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 DCDC2Q9UHG0 476 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 DAPK2Q9UIK4 370 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 CCPG1Q9ULG6 757 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 ZNF541Q9H0D2 1346 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 AKAP10O43572 662 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 KCNH1O95259 989 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 CYP2C9P11712 490 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 TFE3P19532 575 aaPredicted RBP12.94□□□□□ -0.34
SMG8-202ENST00000543872 JAG1P78504 1218 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 DENND1BQ6P3S1 775 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 C15orf39Q6ZRI6 1047 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 WNK4Q96J92 1243 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 SIGLEC10Q96LC7 697 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 NSMCE3Q96MG7 304 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 ACO2Q99798 780 aaKnown RBP12.94□□□□□ -0.34
SMG8-202ENST00000543872 FRMD8P1Q9BZ68 369 aaPredicted RBP12.94□□□□□ -0.34
SMG8-202ENST00000543872 CEP44Q9C0F1 390 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 ST6GALNAC4Q9H4F1 302 aa12.94□□□□□ -0.34
SMG8-202ENST00000543872 DHX35Q9H5Z1 703 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms