RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CCDC14Q49A88 953 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 C2CD6Q53TS8 623 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 TXNDC11Q6PKC3 985 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 DENND5BQ6ZUT9 1274 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 SPEM1Q8N4L4 309 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 JOSD2Q8TAC2 188 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 RIN3Q8TB24 985 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 IFT81Q8WYA0 676 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 NTAN1Q96AB6 310 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ZFYVE19Q96K21 471 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 SLC2A13Q96QE2 648 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 PHACTR1Q9C0D0 580 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 DPEP3Q9H4B8 488 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ZWILCHQ9H900 591 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 LMAN1LQ9HAT1 526 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 HPS4Q9NQG7 708 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 KRT82Q9NSB4 513 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 GTSE1Q9NYZ3 720 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 IL37Q9NZH6 218 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
COPS7A-217ENST00000543537 NDRG2Q9UN36 371 aaKnown RBP11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ARHGAP26Q9UNA1 814 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
COPS7A-217ENST00000543537 CCL26Q9Y258 94 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 R4GN57 208 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 SPTBN4Q9H254 2564 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ANAPC1Q9H1A4 1944 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 TRDMT1O14717 391 aaKnown RBP11.86□□□□□ -0.51
COPS7A-217ENST00000543537 MCF2LO15068 1137 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 OLFM2O95897 454 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 USP17L7P0C7H9 530 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 LCP1P13796 627 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
COPS7A-217ENST00000543537 RGS7P49802 495 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 KPNA1P52294 538 aaPredicted RBP11.86□□□□□ -0.51
COPS7A-217ENST00000543537 NRLP54845 237 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 OGDHQ02218 1023 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 CSTF1Q05048 431 aaKnown RBP11.86□□□□□ -0.51
COPS7A-217ENST00000543537 TNK2Q07912 1038 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 ZNF252P-AS1Q0IIN9 211 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 RUNX3Q13761 415 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 PPP2R5DQ14738 602 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 PDGFRLQ15198 375 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 DPYSL2Q16555 572 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 TMEM196Q5HYL7 178 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 LRIG3Q6UXM1 1119 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 PAQR9Q6ZVX9 377 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 GSTA5Q7RTV2 222 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 PHLDB2Q86SQ0 1253 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 SCN4BQ8IWT1 228 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 FAM172AQ8WUF8 416 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 OVCA2Q8WZ82 227 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 P3H4Q92791 437 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
COPS7A-217ENST00000543537 FAM149B1Q96BN6 582 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 CHFRQ96EP1 664 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 SNF8Q96H20 258 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 FMO2Q99518 471 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 TRIM7Q9C029 511 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 SMG9Q9H0W8 520 aaKnown RBP11.86□□□□□ -0.51
COPS7A-217ENST00000543537 EPC1Q9H2F5 836 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 RETREG1Q9H6L5 497 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 GKN1Q9NS71 199 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 TMEM30AQ9NV96 361 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 ZNF148Q9UQR1 794 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 USP3Q9Y6I4 520 aa11.86□□□□□ -0.51
COPS7A-217ENST00000543537 TRAV19A0A0A6YYK7 116 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 FAM92AA1XBS5 289 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 ZNF840PA6NDX5 716 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 OTOL1A6NHN0 477 aaPredicted RBP11.85□□□□□ -0.51
COPS7A-217ENST00000543537 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 HACD1B0YJ81 288 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 H3BRJ5 948 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 TTI1O43156 1089 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 LTFP02788 710 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 FLT3P36888 993 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
COPS7A-217ENST00000543537 GRIK1P39086 918 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 PTGIRP43119 386 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 SOX9P48436 509 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 MARCKSL1P49006 195 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 CDH6P55285 790 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 MAP3K7CLP57077 242 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 DAOAP59103 153 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 USP46P62068 366 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 SLC7A9P82251 487 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 SLC7A5Q01650 507 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 ADIGQ0VDE8 80 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 SCAPQ12770 1279 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 SIX1Q15475 284 aaPredicted RBP11.85□□□□□ -0.51
COPS7A-217ENST00000543537 EFHC2Q5JST6 749 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 BRMS1LQ5PSV4 323 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 SNX30Q5VWJ9 437 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 MFSD7Q6UXD7 560 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 ZNF276Q8N554 614 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 STKLD1Q8NE28 680 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
COPS7A-217ENST00000543537 RNF157Q96PX1 679 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms